Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01404 ATGCCAGCCCAGAAGCGCTTGCACGAGGGCACAGAGGAGGGTGCTCTGGGAAATGAGAAGAACAACGATGAGCAACCGGAAGATGAACTAGAAACCGTTCGAAGCTCTTCGGGCAACAAAAGGGACAATGAAGAATAcgttgttataaaattatcagatGTACGCAAGGAAGTTCAATGCCCCATCTGTCTagGCATCATTCGCAAAACAAGAACTGTTATGGAATGCCTGCATCGCTTTTGCAGAGAGTGCATAGACAAATCTATGAGACTTGGTAACAATGAATGTCCTGCTTGCCGCACACATTGTGCTAGTCGACGGTCCTTGAGAGATGATCCAAACTACGATGCCCTAATTGCTGTTCTCTATCCAGATATTGACAAGTATGAGGAGGAGGAATATGCATTACATGAGGATGAGAGGGCTCAGAATAAGCAGATCCAAGCTTCTATTGCTCAGACTCTTCGACGACAAACTGAAGCACTGAGTAAGAAGCGAAATGCCAAAGCTACAGCAGTGGCTTTTGTGAGGAGGTCACAGGGTACCTATCGAACTTCACATTCAAGGGTTAGAAGAAGGGTTGCAGTTAACCTTGAAGGATCTTCTGACAGTGATGATGCAATTGATAATGATGGGAGCAAGGGTCCATCTTCTGGTGACGAACAGACAGAAACCAGGCTGAAAAGAACCAAGAGAGGGGGAGAAGTACAATGTTCTCAGAATTCTGCTGCTGGTGCTGATGGAGCTGGTGAGGAAAATGTTCCTGAAGCAAATAGAGAGATCATGGGTCCATCTGGTACTCTTGCCTGGGGAAAAAATGGCCAGCGGAGTCATACCCGAGTCAATGGTAAGAATACCAGAAACAATCGCATCTCCAAATTGGTCGATCATCTCCGCAACTCAGAAAAAACTAATGACGAGTTGGGTATCCATCTCATGCTTGTCTCTTTTGATGAGCAAAGAATACCTAGTTTGCAGCAGCCCTACCTTTGCTGCAGGCCTAAGTTATCTGTGAGGCACCTATGCAAGTATGTCTCACGTCAAACTGCAATGCAAGCCAATGAAGTTGAATTAAGCTTGGTAAAAGAGCAGCAAGCCAATATTAAAAGAGCTGCAGGCACAGTAAATCCATGCAAAGACAAGTTACAAGTTCTGGGAGAGCAAGAAATTTTGGCAGAACTAGAAACTGATAATCTCAGCTGCGGCCATCTGCTTATGACGTACAAGAGGAAATTATGGAACTCAAAAGAAGTTGATCTGAGGGGAAAGATGAGCAGTCACCTGAACCATTCTTTGCTCAGTACATA 1307 0.4438 MPAQKRLHEGTEEGALGNEKNNDEQPEDELETVRSSSGNKRDNEEYVVIKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAVLYPDIDKYEEEEYALHEDERAQNKQIQASIAQTLRRQTEALSKKRNAKATAVAFVRRSQGTYRTSHSRVRRRVAVNLEGSSDSDDAIDNDGSKGPSSGDEQTETRLKRTKRGGEVQCSQNSAAGADGAGEENVPEANREIMGPSGTLAWGKNGQRSHTRVNGKNTRNNRISKLVDHLRNSEKTNDELGIHLMLVSFDEQRIPSLQQPYLCCRPKLSVRHLCKYVSRQTAMQANEVELSLVKEQQANIKRAAGTVNPCKDKLQVLGEQEILAELETDNLSCGHLLMTYKRKLWNSKEVDLRGKMSSHLNHSLLST 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01404 435 CDD RING-HC_RING1_like 60 100 - -
Bva14g01404 435 ProSitePatterns Zinc finger RING-type signature. 76 85 IPR017907 -
Bva14g01404 435 SUPERFAMILY RING/U-box 46 131 - -
Bva14g01404 435 ProSiteProfiles Zinc finger RING-type profile. 60 100 IPR001841 -
Bva14g01404 435 PANTHER OS11G0578200 PROTEIN 1 413 IPR044592 -
Bva14g01404 435 Pfam Zinc finger, C3HC4 type (RING finger) 59 99 - -
Bva14g01404 435 MobiDBLite consensus disorder prediction 270 289 - -
Bva14g01404 435 SMART ring_2 60 99 IPR001841 -
Bva14g01404 435 PANTHER OS11G0578200 PROTEIN 1 413 - -
Bva14g01404 435 MobiDBLite consensus disorder prediction 1 38 - -
Bva14g01404 435 MobiDBLite consensus disorder prediction 182 289 - -
Bva14g01404 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 130 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01404 Bva-Chr14 7001885 7005768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01404 58 183 C3H Transcription Factor Family AT2G30580 28.788 1.89e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01404 K10695 - zju:107425269 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01404 14 7001885 7005768 Bva14g01404 14 7001885 7005768 ECH
Bva14g01404 14 7001885 7005768 Bva13g01155 13 5760125 5764995 ECH