Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01400 ATGGAAACAAACAAAGCTGAGGGAAAGAGGACCTTGAGTTACAAAGATGAGGAattagaagatgaagaagaggaagatgatgatgttAATGATGTGAGCTTTGGAGAAGatgggagaaagaagagagtgaTGACAGATCTCTACGGCACCAAGAGAGGTTCCAAAGGTGGATCCTCCTCAATGCCACCTTCTTGTCAGGTGGATGATTGCCACAATGATCTGAGTGATGCCAAGCAGTACCACCGGAGGCACAAGGTCTGCGAATACCATGCCAAGGCTCTCTCCGTACTCATTGCAGGGCTTCAGCAACGTTTTTGCCAGCAATGTAGCAGGTTTCATGAACTCTCCGAATTTGATGACTCTAAAAGGAGCTGCAGAAGACGTTTGGCTGGACACAACGAGAGGCGTCGAAAGAATGCATCTGATTACCATGGGGAAGGTTTGAATTA 449 0.4187 METNKAEGKRTLSYKDEELEDEEEEDDDVNDVSFGEDGRKKRVMTDLYGTKRGSKGGSSSMPPSCQVDDCHNDLSDAKQYHRRHKVCEYHAKALSVLIAGLQQRFCQQCSRFHELSEFDDSKRSCRRRLAGHNERRRKNASDYHGEGLN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01400 149 PIRSF SBP 1 149 IPR017238 GO:0003677|GO:0003700|GO:0009908
Bva14g01400 149 Gene3D - 55 126 IPR036893 GO:0003677|GO:0005634
Bva14g01400 149 Pfam SBP domain 65 138 IPR004333 GO:0003677
Bva14g01400 149 ProSiteProfiles Zinc finger SBP-type profile. 62 139 IPR004333 GO:0003677
Bva14g01400 149 SUPERFAMILY SBT domain 63 143 IPR036893 GO:0003677|GO:0005634
Bva14g01400 149 MobiDBLite consensus disorder prediction 17 32 - -
Bva14g01400 149 MobiDBLite consensus disorder prediction 1 16 - -
Bva14g01400 149 MobiDBLite consensus disorder prediction 33 48 - -
Bva14g01400 149 MobiDBLite consensus disorder prediction 1 65 - -
Bva14g01400 149 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 17 140 IPR044817 GO:0003677
Bva14g01400 149 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3 17 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01400 Bva-Chr14 6984736 6986473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01400 55 142 SBP-box Gene Family AT2G33810 69.318 1.09e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bva14g01400 SBP 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01400 - - aip:107631217 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01153 13 5750559 5752168 Bva14g01400 14 6984736 6986473 BWGD
Bva14g01400 14 6984736 6986473 Bva14g01400 14 6984736 6986473 ECH
Bva14g01400 14 6984736 6986473 Bva13g01153 13 5750559 5752168 ECH
Bva07g01735 07 16110173 16111719 Bva14g01400 14 6984736 6986473 ECH
Bva09g00640 09 3334225 3336269 Bva14g01400 14 6984736 6986473 ECH
Bva07g01996 07 17419030 17420557 Bva14g01400 14 6984736 6986473 ECH