Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01399 ATGTTGAGTAACTGTGAGAAAATGCTACTCATCCCTCAGCCACAACAGAATATTCATTCAGATGATCAAAAGGTCTCGATGGCTTCTTCTTCCACTGGTGGTAGGGTAATGGAAAAACCAGGTCAAGAGCTTCTTCAGCTGCAGCAACAAGCTCTGAAGTGCCCTCGTTGTGATTCATCCAACACAAAGTTCTGCTACTACAACAACTACAGCTTGTCTCAGCCAAGGCACTTCTGCAAAGCCTGCAAGAGATACTGGACAAGAGGGGGAACCTTGAGGAATGTCCCTGTTGGCGGTGGATGCAGAAAAAACAAGCGTGTCAAGAGACCAACTTCATCTTCTGCCATTGATGCCTCCACTTCTGCTTCTGCACCTTCTTCTTCGTCTTCAGCTCCTAGTGCCAATTCAAACCCTGTCTCACAAACCCAGATCGATATTGCTTCCTCCTCAAATCACATGAATCCTTTGTTTTATGGGTTAACCAGTACCTCTTGTGAGATGAATCTTCCATTTCCAAGTTTCAATTCAAGAGTGGAGACTATTTCTGGGTATGATCATCTCAAGCCTCAGCTAAATGCTATTGGGTTAGGTTATTCTTCTGGGGTTATGCCTAATGAAGCTAATGATAATGGTTATAGAAATGggttttcttcaaataatgCTCTTCTTTCGAGTTATTCCATCTTTGGTGGTTCTTCATCAAGTTCCAATACACCCACTACTCCAATTATGGCTTCTTTGTCCCACTCTATCGCAAAAGTTCATCAACGGTGGCGTAGCGAAAGATGCAGCAAATGCTTTTCATGGTTTTGCAGCTCTAGAAGGGATGCATA 833 0.4274 MLSNCEKMLLIPQPQQNIHSDDQKVSMASSSTGGRVMEKPGQELLQLQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPTSSSAIDASTSASAPSSSSSAPSANSNPVSQTQIDIASSSNHMNPLFYGLTSTSCEMNLPFPSFNSRVETISGYDHLKPQLNAIGLGYSSGVMPNEANDNGYRNGFSSNNALLSSYSIFGGSSSSSNTPTTPIMASLSHSIAKVHQRWRSERCSKCFSWFCSSRRDA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01399 277 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 2 255 - -
Bva14g01399 277 Pfam Dof domain, zinc finger 50 106 IPR003851 GO:0003677|GO:0006355
Bva14g01399 277 MobiDBLite consensus disorder prediction 111 140 - -
Bva14g01399 277 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Bva14g01399 277 MobiDBLite consensus disorder prediction 97 140 - -
Bva14g01399 277 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
Bva14g01399 277 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 255 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01399 Bva-Chr14 6967727 6969767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01399 1 171 C2C2-Dof Transcription Factor Family AT1G28310 53.409 6.14e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva14g01399 zf-Dof 1.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01151 13 5730601 5731890 Bva14g01399 14 6967727 6969767 BWGD
Bva14g01399 14 6967727 6969767 Bva14g01399 14 6967727 6969767 ECH