Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01395 ATGGCTGCAGCTTCTGCAGCTCTCAATtccctctcttctctctccctTCACTCCTCTCCACGCTTCTCTGTGCTACCCTCTACCAAATTCACCTTCTCCCTCACAACCCGTAACACTCAACCATTTCTCTCTACCTCCTCATTTCCTATTGCTTCTTTCGGCGCAATCAGAACCAAATCCTCCGACGACATTGACACCTCCTTCTTCGACAATGTGAACCCAGAAGAAGAAATCCCTTTCAACCCCCCGGAAATTCCCGAAGGCTTCGTTGCCCCTCCTTCCTTCGACGAGGGACCTATGGAGACTGAAGATGAAATTGCTGCAGCATACGAGGAGCTTTACGGTCCTGTATACAGTGGCGTTAGCGTTCTTGGCCAAGATATACACGTAATGGACTCTAAGTTGAAGATCGAAGATGGGTTTACTTCAGAAGCGAAGACAGAGAAGATAAGGGATGGATTTGAAGAAAGAGTGGTACAGGTTAGAAGAGTGACCAAGGTGGTGAAAGGAGGGAAGCAATTGCGTTTCAGGGCAATTGTGGTGGTGGGCGACAAGGAAGGCCGAGTGGGTGTTGGAGTTGGGAAAGCAAAGGAAGTGATAGCTGCAGTTCAGAAATCAGCTGTAGATGCAAGGAGGAATATCATCACAGTGCCTATGACTAAGTACTCGACTTTCCCACATAGATCTGAGGGAGATTATGGAGCAGCAAAGGTGATGCTTAGACCTGCTTCTCCTGGTACTGGAGTTATTGCTGGTGGGGCTGTGAGAATTGTTCTGGAAATGGCCGGCGTCGATAATGCTTTAGGAAAGCAACTCGGGAGTAACAATGCCCTCAACAATGCCAGAGCAACTGTTGTTGCTATACAGAAAATGAGGCAGTTCAGTGAGGTTGCCCAGGATCGTGGGATCCCCATGGAAGAACTATGGAAGTA 932 0.4732 MAAASAALNSLSSLSLHSSPRFSVLPSTKFTFSLTTRNTQPFLSTSSFPIASFGAIRTKSSDDIDTSFFDNVNPEEEIPFNPPEIPEGFVAPPSFDEGPMETEDEIAAAYEELYGPVYSGVSVLGQDIHVMDSKLKIEDGFTSEAKTEKIRDGFEERVVQVRRVTKVVKGGKQLRFRAIVVVGDKEGRVGVGVGKAKEVIAAVQKSAVDARRNIITVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVDNALGKQLGSNNALNNARATVVAIQKMRQFSEVAQDRGIPMEELWK 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01395 310 Hamap 30S ribosomal protein S5 [rpsE]. 131 307 IPR005712 GO:0003735|GO:0006412|GO:0015935
Bva14g01395 310 TIGRFAM rpsE_bact: ribosomal protein uS5 153 307 IPR005712 GO:0003735|GO:0006412|GO:0015935
Bva14g01395 310 Pfam Ribosomal protein S5, N-terminal domain 154 218 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bva14g01395 310 PANTHER RIBOSOMAL S SUBUNIT 4 310 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bva14g01395 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 224 302 IPR020568 -
Bva14g01395 310 PANTHER 30S RIBOSOMAL PROTEIN S5, CHLOROPLASTIC 4 310 - -
Bva14g01395 310 ProSiteProfiles S5 double stranded RNA-binding domain profile. 154 217 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bva14g01395 310 SUPERFAMILY dsRNA-binding domain-like 150 219 - -
Bva14g01395 310 ProSitePatterns Ribosomal protein S5 signature. 171 203 IPR018192 -
Bva14g01395 310 Gene3D - 220 309 IPR014721 -
Bva14g01395 310 Pfam Ribosomal protein S5, C-terminal domain 231 301 IPR005324 GO:0003735|GO:0005840|GO:0006412
Bva14g01395 310 Gene3D - 145 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01395 Bva-Chr14 6943339 6944803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01395 154 294 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 32.215 2.57e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01395 K02988 - zju:107425394 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01395 14 6943339 6944803 Bva14g01395 14 6943339 6944803 ECH