Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01388 ATGGAGAACAACACCAGTTCAGCAAGAACAGACAGAAAACTCATAGAGAGAAACAGAAGAAATCAAATGAAGGCTCTTTACTCCAAACTCAACTCAATTGTGCCTCGTCAGCAAAGCTCAAggGGAGGGACATCTCTGCCGGATCAACTACATGAAGCCACAAAGTACATAAAGAAGTTGCAGATTAACttagagaaaatgaaggagaagaaagatagCCTGATGGAGATTCAGAAGCCAAGTAATGTGAGAATGAATAGAGGGAAGGTTTTGGGGTTAAAAGCACCAGAAATTGAGATCCACCAAATGGGTTCTGCCTTAGAGGTTGTTCTAATAACTGGGTTGGATTGTCAGTTCATGTTCAATGAGGTGCTTCGGGTTCTTTCCGAAGAAGGAGCTGACATTGTTAATGCCAGTTACACAGTTGTTCAAGATACTGGTTTTCACATAATACATTCTAAGGTGGAGCAATCTACAAATGGACCTGCAAGGATAACTGAGAGATTGAAGAGATTTATGTATGGTTCTGGTGCATTATG 539 0.3878 MENNTSSARTDRKLIERNRRNQMKALYSKLNSIVPRQQSSRGGTSLPDQLHEATKYIKKLQINLEKMKEKKDSLMEIQKPSNVRMNRGKVLGLKAPEIEIHQMGSALEVVLITGLDCQFMFNEVLRVLSEEGADIVNASYTVVQDTGFHIIHSKVEQSTNGPARITERLKRFMYGSGAL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01388 179 Pfam Helix-loop-helix DNA-binding domain 9 61 IPR011598 GO:0046983
Bva14g01388 179 Gene3D - 1 89 IPR036638 GO:0046983
Bva14g01388 179 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 174 IPR015660 GO:0003700|GO:0006357
Bva14g01388 179 Coils Coil 50 77 - -
Bva14g01388 179 SMART finulus 13 66 IPR011598 GO:0046983
Bva14g01388 179 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 60 IPR011598 GO:0046983
Bva14g01388 179 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 82 IPR036638 GO:0046983
Bva14g01388 179 PANTHER TRANSCRIPTION FACTOR BHLH162 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01388 Bva-Chr14 6901332 6902275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01388 3 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.308 5.07e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva14g01388 HLH 6.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01388 - - gmx:100814407 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01138 13 5665497 5666743 Bva14g01388 14 6901332 6902275 BWGD