Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01366 atgcaaGGTCAAGAagtgaaggaagaagaagacgaCGAAGGGCCACCACCTGGGTGGCAACCCATAGAGAAAACGCAAAGTCAAGAagtgaagaaggaagaagaagaagacgatGAAGGTCCACCACCTGGGTGGCAACCCATGGAGAAAATGCAAAGTCGAGAagtgaagaaggaagaagaagaagacgatGAAGGTCCACCGCCTGGATGGCAACCCATCCACCCTCCACCTTCGCAACCGCCACCACAGCCGTCATCGAAACGACCTCGGCCATCTGAAATGGGTCAAATGGTTTGCGGTTCTTGTCGTCGCCTTCTTTCATACCCACAGGGTTCCAAATATGTCAAATGTTCTTGCTGTCAGACCGTCAACCTTGTATTAGAAGCTCATCAGGTTGGGCAAGTTAAGTGTGGGAATTGTGCAGTATTGCTAATGTACCCATATGGTGCTCCACAAGTTAGGTGTTGCTCCTGCCGATTCGTGACAGAAATTGCGGCACACAACAGGCGACCTCCGTGGTCAGTACAACAAGGAAAATCAGCTCCTCCGCCCAGAACTGTTTGTTA 569 0.4411 MQGQEVKEEEDDEGPPPGWQPIEKTQSQEVKKEEEEDDEGPPPGWQPMEKMQSREVKKEEEEDDEGPPPGWQPIHPPPSQPPPQPSSKRPRPSEMGQMVCGSCRRLLSYPQGSKYVKCSCCQTVNLVLEAHQVGQVKCGNCAVLLMYPYGAPQVRCCSCRFVTEIAAHNRRPPWSVQQGKSAPPPRTVC 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01366 189 MobiDBLite consensus disorder prediction 69 89 - -
Bva14g01366 189 PANTHER PROTEIN LOL2 25 183 - -
Bva14g01366 189 MobiDBLite consensus disorder prediction 1 95 - -
Bva14g01366 189 Pfam LSD1 zinc finger 138 162 IPR005735 -
Bva14g01366 189 Pfam LSD1 zinc finger 100 124 IPR005735 -
Bva14g01366 189 MobiDBLite consensus disorder prediction 1 16 - -
Bva14g01366 189 PANTHER PROTEIN LSD1 25 183 IPR040319 -
Bva14g01366 189 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 97 127 IPR005735 -
Bva14g01366 189 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 135 163 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Bva14g01366 zf-LSD1 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01366 - - gmx:100780865 186.808