Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01305 atgaCAATGAGCCACAACAACAATGTTAACGGTGCCGGCGACACAACGCTGACCAAAGTGTTCGTCGGAGGTTTGGCGTGGGAAACTCCGAAAGAGACCATGCAGAAGCATTTCGACAAGTTCGGCGAGATCCTCGAGGCCGTCATTATCTGCGATAAGCTCACCGGCAGATCCAAGGGCTATGGCTTCGTCACCTTCAAGGAGCCGGAGGCGGCGAAGAAAGCTTGCCAGGATCCCACGCCGATCATTAATGGCCGCCGAGCCAACTGCAATCTGGCTTCGCTGGGAGCACGCCGCCCGAGGTCTTCCGCCAATTCCCCTCCTCGACAACAACCTGGATCCAATGGTGGACCCAGGAACGCACCTGCAGCACCCGCCAATCACGTCAATTGGTATTATCCGGTGGGGACACCAGCTTCTCCTTTCCATCATCAGCACCACCAATCCGTTCCAGTCTATGGATACACGCCAACGTACATTGCAACAGACATAAATTACAATCAgAAGATGAACTACAATGGCGGTGGGGCCTACATGAATGGGCACTATTCTGCTGTGTACCCGAGCCAGGCTATTGTAGGTGCAAATGCACTGATGCCGATGTACCACCACCCTTTTTATCAATGTCATCCATCGCAGACAATGGGGGTACCGGTACCCGCCCACGTATTCCAGCCAACAACAGCGGGGCATTTCACTGCAGTGCCAGCCATCATGTCAAAACCCGCATCTACCACTACCAACACAGGTGTGGCTGGCGCAGGGGAGTGCTTTAAGAAAGTTGCTTA 788 0.5368 MTMSHNNNVNGAGDTTLTKVFVGGLAWETPKETMQKHFDKFGEILEAVIICDKLTGRSKGYGFVTFKEPEAAKKACQDPTPIINGRRANCNLASLGARRPRSSANSPPRQQPGSNGGPRNAPAAPANHVNWYYPVGTPASPFHHQHHQSVPVYGYTPTYIATDINYNQKMNYNGGGAYMNGHYSAVYPSQAIVGANALMPMYHHPFYQCHPSQTMGVPVPAHVFQPTTAGHFTAVPAIMSKPASTTTNTGVAGAGECFKKVA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01305 262 SUPERFAMILY RNA-binding domain, RBD 12 120 IPR035979 GO:0003676
Bva14g01305 262 MobiDBLite consensus disorder prediction 97 117 - -
Bva14g01305 262 SMART rrm1_1 19 91 IPR000504 GO:0003723
Bva14g01305 262 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 95 IPR000504 GO:0003723
Bva14g01305 262 PANTHER RNA-BINDING PROTEIN ARP1-RELATED 1 249 - -
Bva14g01305 262 PANTHER GEO13361P1-RELATED 1 249 - -
Bva14g01305 262 MobiDBLite consensus disorder prediction 97 123 - -
Bva14g01305 262 Gene3D - 2 111 IPR012677 -
Bva14g01305 262 CDD RRM_RBM24_RBM38_like 18 93 - -
Bva14g01305 262 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 77 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01305 Bva-Chr14 6399221 6402069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01305 14 154 C2H2 Transcription Factor Family AT2G19380 31.206 1.37e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01305 - - qlo:115954679 357.451