Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01294 ATGGGAACGGAGGGGATGGGGACGTGGGACACATGGGAGGAGCTCCTCCTCGGTGGGGCGGTTCTCAGACACGGGACCCGAGACTGGAACGTCGTCGCGGCGGAGCTCCGAGCCCGAACTGTCTGCCCGTACACTTTCACCCCCGagGTCTGTAAAGCCAAGTATGAAGACTTGCAACAACGTTATTCTGGGCGCACGGCTTTTGAGGAACTTAGGAAGAAAAGAGTGGCAGAGCTCAAGAAAGCTCTTGTGCTATCTGAAGACTCAATTGGGTCACTTAAATCGAAGCTTGAGTCACTCCAAGCTGAGAAAAATGCAGAAAGAGATGATTGTCGTGTTGACAATGGCTCAGGTGTTCTAGAATCAGACCTGCCTTCGCAGAAATCTGAAAGAGTCGAATCTTCCACTAAAGAGACATCAAAAGATGGGCTATCTGCTGGCAGTTTTACACGTGAAACTAGGACAAACTGGTCTCCGGACTGTCAGGCTCCGACAGTGTCCTACGAAGAAATGGAGACAAAGCATGAAGTTTCACAGTCTTCTGAACATGACAAAGTTTCGAACATAGATAGGTTGGCGCACACCATATATGATGGACGAGGAGGGAGtttaaggaaaagaagagggaagaggaagagaaaggacTGTAGCAAAGGTGTCAAGGAAACTAGTGTTGGAGAAAGTGACATTTTGGATTCAGCCGGTGTTGTCTCccaaagtaaagaaaattcCATGAGTAACTGTGGTGAGGCTGCCAAGCCTGCTAGTGTAGATGATCAGAATAGGATCTTGAAGAAGAATACAATGGAAGAGTTGATGGGAATTTTAAACTCCATCTTAGAGAACAAAGGTGCCTCTGCGTTCCGACTCAGACTAGATAGCCAGAAGAGAGGAAGGTACAAGAAAATGATCCGACAGCACATGGATTTTGATACTCTAAGGTCAAGAATAAGCagccaaaaaataaactcaatGAAGGAACTCTTCCGGGACTTACTGCTACTAGCAAACAATGCCTTAGTCTTCTATTCCAAGGGCACGAGAGAATACAAATCTGCTCTTCTTCTAAGAGACCTGATCACCAACAAACTTAGGGAGAATTTTGAAGGTTCCAGCAGCAAACTTGTAACCCGAGCAAACATTTCCACCACATTACCATTACATTGTCCTACTGTGAAACCCAGAAGTGTGCGCCCCAGAAGCCGAAAGATTGTGGCAAAGCCACATGGTGGAGGCAATTCCGGTTCTGGGGTCTCTCAGGGATCCAAGAAACCTGCTAAAGTTGATTCCCCACCTTCAGTGGAATCCTTGGTTACCAAGAAGAAAGGCTCTGGTAGGCCGAAGAAGGTTGGACGCGCAGCCGTTCAATG 1370 0.4518 MGTEGMGTWDTWEELLLGGAVLRHGTRDWNVVAAELRARTVCPYTFTPEVCKAKYEDLQQRYSGRTAFEELRKKRVAELKKALVLSEDSIGSLKSKLESLQAEKNAERDDCRVDNGSGVLESDLPSQKSERVESSTKETSKDGLSAGSFTRETRTNWSPDCQAPTVSYEEMETKHEVSQSSEHDKVSNIDRLAHTIYDGRGGSLRKRRGKRKRKDCSKGVKETSVGESDILDSAGVVSQSKENSMSNCGEAAKPASVDDQNRILKKNTMEELMGILNSILENKGASAFRLRLDSQKRGRYKKMIRQHMDFDTLRSRISSQKINSMKELFRDLLLLANNALVFYSKGTREYKSALLLRDLITNKLRENFEGSSSKLVTRANISTTLPLHCPTVKPRSVRPRSRKIVAKPHGGGNSGSGVSQGSKKPAKVDSPPSVESLVTKKKGSGRPKKVGRAAVQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01294 456 PANTHER BROMODOMAIN PROTEIN 1 453 - -
Bva14g01294 456 Gene3D - 258 375 IPR036427 GO:0005515
Bva14g01294 456 MobiDBLite consensus disorder prediction 386 456 - -
Bva14g01294 456 Pfam Bromodomain 275 353 IPR001487 GO:0005515
Bva14g01294 456 SUPERFAMILY Bromodomain 256 368 IPR036427 GO:0005515
Bva14g01294 456 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 1 453 - -
Bva14g01294 456 SMART bromo_6 265 369 IPR001487 GO:0005515
Bva14g01294 456 MobiDBLite consensus disorder prediction 200 224 - -
Bva14g01294 456 ProSiteProfiles Bromodomain profile. 280 350 IPR001487 GO:0005515
Bva14g01294 456 CDD Bromodomain 268 364 - -
Bva14g01294 456 Coils Coil 90 110 - -
Bva14g01294 456 CDD SANT 8 55 IPR001005 -
Bva14g01294 456 MobiDBLite consensus disorder prediction 104 161 - -
Bva14g01294 456 MobiDBLite consensus disorder prediction 139 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01294 Bva-Chr14 6339547 6343239 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva14g01294 Bromodomain 1.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01294 - - gmx:100804245 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01069 13 5201491 5205133 Bva14g01294 14 6339547 6343239 BWGD