Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01280 ATGAATGATCTCTTCTCAAGCTCCTTCAGACAACACTCTGACTTTAAGCAGCAGAACTTCCAGGATGATGTCGAGGCCGGAAAAGAAAGTGTCAACCTTGATAAATTCTTCGACGATGTTGAGAATGTCAAAGAAGATATGAGACATGTTGAGCAACTTTACAGGAAGTTGCAGGAAGCTAATGAAGAAAGCAAAATCGTTCACAATGCTAAAACCATGAAAGACCTCCGAGCCCGGATGGACAAAGATGTGGAGCAGGTCCTCAAACGTGTCAAAGTCATTAAGGGCAAGCTTGAAGCATTGGAGCGATCCAATGCAGCTCACAGAAACATCCCAGGATGCGGTCCTGGTTCGTCAGCAGATCGAACCAGGACTTCAGTGGTTAGTGGCTTGGGCAAGAAACTCAAAGATATGATGGATGATTTCCAAGGGCTAAGAGCAAGAATGCAAATGGAGTATAAAGAAACAGTGGAACGCAGGTATTTCACAATAACAGGAGAGAAAGCAGATGAAGAAACCATAGAGAATTTGATATCAAGTGGAGAAAGCGAAAGTTTCCTGCAGAGAGCAATTCAGGAACAAGGGAGGGGCCAGATTTTGGACACCATATCAGAAATCCAAGAAAGGCATGATGCTGTTAAGGAAATAGAGAGGAATTTGATTGAACTACATCAGGTGTTTTTGGATATGGCTGCTCTTGTTGAGTCTCAAGGCCAACAGCTCAATAACATAGAAAGCAATGTTGCTCATGCTAGCTCTTTTGTGAGAAGAGGCACAGAACAGCTCCAGGAAGCTAGAGAGATTCAGAAGAGCTCAAGGAAATGGATGTGCTATGCTGTTCTTCTTGTCATCATTCTCATCATTGTCATCCTATTTCCTCTATTGGTATCACTTTTCCCTCACATGTTGAGATG 914 0.43 MNDLFSSSFRQHSDFKQQNFQDDVEAGKESVNLDKFFDDVENVKEDMRHVEQLYRKLQEANEESKIVHNAKTMKDLRARMDKDVEQVLKRVKVIKGKLEALERSNAAHRNIPGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQGLRARMQMEYKETVERRYFTITGEKADEETIENLISSGESESFLQRAIQEQGRGQILDTISEIQERHDAVKEIERNLIELHQVFLDMAALVESQGQQLNNIESNVAHASSFVRRGTEQLQEAREIQKSSRKWMCYAVLLVIILIIVILFPLLVSLFPHMLR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01280 304 Gene3D - 30 162 - -
Bva14g01280 304 SUPERFAMILY t-snare proteins 32 258 IPR010989 GO:0016020|GO:0016192
Bva14g01280 304 PANTHER SYNTAXIN-124-RELATED 6 295 - -
Bva14g01280 304 PANTHER SYNTAXIN 6 295 IPR045242 -
Bva14g01280 304 CDD SNARE_syntaxin1-like 202 264 - -
Bva14g01280 304 Gene3D - 196 295 - -
Bva14g01280 304 Coils Coil 40 70 - -
Bva14g01280 304 Coils Coil 84 104 - -
Bva14g01280 304 SMART SynN_4 28 154 IPR006011 GO:0016020
Bva14g01280 304 CDD SynN 33 190 IPR006011 GO:0016020
Bva14g01280 304 Pfam Syntaxin 35 238 IPR006011 GO:0016020
Bva14g01280 304 SMART tSNARE_6 198 265 IPR000727 -
Bva14g01280 304 Pfam SNARE domain 240 291 IPR000727 -
Bva14g01280 304 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bva14g01280 304 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01280 Bva-Chr14 6276609 6278137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01280 1 303 SNARE and Associated Proteins AT1G61290 76.238 1.32e-175 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01280 K08486 - gmx:100818999 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01050 13 5107501 5109084 Bva14g01280 14 6276609 6278137 BWGD