Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01278 ATGGCAACTGGTTCGTCTTCTTCCTCGTCTAAGGTTTGCTATAATTCAGACTGCAAGGAATTGAAGTCAGAGAGGCCTAAGAAGGGTTGGAGACTGCGAAGTGGGGAGTATTGCGAGCTTTGTGATAGATGCGGCTCTGCTTTTGAAGAGGGAAGGTTTTGCgagatttttcatttgaatgcATCTGGTTGGAGGAATTGTGAGACTTGTCGGAAGCGGATTCATTGTGGATGCATAGCTTCAAGTCATGCCTTTACTTTGTTAGATACTGGAGGAGTGGAATGCTTTACATGTgccaaaaacttttttttcttgCCATCAAATCCAGCATGGTcaccatctttttcttttcaatctcGTATTTCTGAGAAAATATCAGAGAGACTTAAAGACGTGTCTGCAAAAAGTTGGAGTCATTTAGCTGGGTCAGGTCCTGTGCCATGGAAACAAGCGCCGAGCTTGTTCAATTCTTCAGTTTCTTCATCTGACCTGCGTTCAGATGTACCGTCTCTAGTTGATTTATCAACTACTATTGATAAAATGTATGGAAATGAAAGGTTACCTGCCTCTTtgcttgaaaagaaaaatgaggatTTGTCTGGAATGCCAATTAATTGGAATGTAAAGCTTGGTACGCGGGAAATGATGCTCTTAAATGGAATTAGGAATGAGGATAAATCAAGTTCTTCTTTGAATATATGCCAACAGCCTTCTTTGAAGGAAGATTCATCTATCCCTCAGTTTGGTTTGACTGTACCTTACACATCtccaaatgaaataaatggtCAAATTGGGATAACTGGAAGTTATCCACCACAAAATCCTGCCCTTCCTCAAGGAAAGCAATTTAGTAATACTGTACATGTTACACTTGACTCATCAGGTGAAGCTCAGATTCGCAATGGACGGCCTCGTGCAGATAACCGAGGAAGAAACCAGTTACTACCACGGTACTGGCCCAGGTGTACTGATCAGGAGCTGCAGAAAATATCCGCAGATTCTAATTCTGTAGTTACCCCATTGTTTCAAAAAACTTTGAGTGCTAGTGATGCTGGACGAATTGGGCGTTTAGTGCTACCAAAAAAGTGTGCTGAGGCCTACTTTCCACCAATTTCTCAGCCTGAAGGGTTGCCTCTTAAAATCCTTGATGCAAAGGGCAAGGAATGGATATTTCAGTTCCGCTTCTGGCCAAACAATAATAGCAGAATGTATGTGTTAGAGGGTGTCACTCCCTGCATACAGTCCATGCAATTGCAAGCAGGTGACACAGTTACCTTTAGTCGATTGGAGCCAGAAGGGAAGTTGGTTATGGGATTTCGAAAGGCTTCAAGTGCTACACCATCTGATCAGGACAATGAAACAACTAAGACTGGAAATGGGTTTTCTACACATGGTGAAGTTGAATTAGCAGATCCTAGTTCATGGtctaaaattgataaatcagGATACATAGCAAAAGAAGCACTGGGGAGCAAACCTTCAATCTccagaaagagaaagactAGCACATTGGGTTCAAAGAGTAAACGTCTGAGAATTGAAAATGAGGACCTAATAGAGCTGAAGATTACATGGGAAGAAGCTCAAGGTCTGCTCCGTCCTCCGCCTAACCATGTTCCCAGCATTGTGGTGATTGAAGGCTTTGAATTTGAGGAATACGAGGATGCTCCGGTGCTTGGGAAGCCAACTTTTTATACCAATGATAAAACAGGTGAAAAGGTTCAGTGGGCTCAATGTGAAGATTGTAACAAGTGGCGCAAATTGCCAGCTAGTGTTCTTCTTCCATCAAAATGGACATGTTCTGATAATTCATTGGACCCAGAGAGATCTTCTTGTTCAGCAGCGCAAGAATTAACAGCAGAACAGCTTGAGGATTTGCTACCTTATTGTGGTCCAGTTCCCAGGAAAATGAAGGCTGCCAAGCAGGATCCTGATAATGTTGAAGCTTTAGAGGGGCTTGATACACTTGCAAACCTAGCTATCTTGGGAGAGGGGGCACTCCCATCATCTGCCCAGGCCACAACAAAGCACCCACGACACAGGCCTGGCTGTTCTTGCATCGTCTGCATTCAGCCTCCCAGTGGGAAGGGCCCCAAGCACAAGCAGTCATGCACATGCAATGTTTGCCTGACAGTGAAGCGCCGTTTCCGCACCCTAATGTTACGGCGCGAAAAGAAACAATCAGAAAGAGAAGCAGAGACAACACGGAAGAAGATCCAGCAACAGCAGGCACAACCTTTGTCTGAGATTCTGCTAGACGATGATTCCCTGCCTTGTAGCAACACAGGAGACAGTAGTCCAAATCATATCAGGGAGACTAATGACGGTTCTGATGATGATCCTAACAGAGTAAAGTCATCTGCTTCAGCTTCACCATTTAAAGGTCAAATTGATCTCAATATCCAGCCAGAGCGAGAGGAAGAGTTGTCACCTGGTTCAGATTCTGGTAGCATGATGAAATTACTCCATGATGCTACTGAGAGGTACCTCAGGCTGCAGAATATGGCAAGCTCTAGTGTGGGAGATTCATCAGGCATTCAGTCACAGCGAAATGGAGATGAAATCAGGGAAGAGAAACTTAGCAATGGTGTTGCCCTTAGTAACAGTAATCATAAAGCTGATGAGGATCATACCCAAACTTTGCCTATGAATGTGTG 2657 0.4208 MATGSSSSSSKVCYNSDCKELKSERPKKGWRLRSGEYCELCDRCGSAFEEGRFCEIFHLNASGWRNCETCRKRIHCGCIASSHAFTLLDTGGVECFTCAKNFFFLPSNPAWSPSFSFQSRISEKISERLKDVSAKSWSHLAGSGPVPWKQAPSLFNSSVSSSDLRSDVPSLVDLSTTIDKMYGNERLPASLLEKKNEDLSGMPINWNVKLGTREMMLLNGIRNEDKSSSSLNICQQPSLKEDSSIPQFGLTVPYTSPNEINGQIGITGSYPPQNPALPQGKQFSNTVHVTLDSSGEAQIRNGRPRADNRGRNQLLPRYWPRCTDQELQKISADSNSVVTPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKASSATPSDQDNETTKTGNGFSTHGEVELADPSSWSKIDKSGYIAKEALGSKPSISRKRKTSTLGSKSKRLRIENEDLIELKITWEEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPTFYTNDKTGEKVQWAQCEDCNKWRKLPASVLLPSKWTCSDNSLDPERSSCSAAQELTAEQLEDLLPYCGPVPRKMKAAKQDPDNVEALEGLDTLANLAILGEGALPSSAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQSCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKIQQQQAQPLSEILLDDDSLPCSNTGDSSPNHIRETNDGSDDDPNRVKSSASASPFKGQIDLNIQPEREEELSPGSDSGSMMKLLHDATERYLRLQNMASSSVGDSSGIQSQRNGDEIREEKLSNGVALSNSNHKADEDHTQTLPMNV 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01278 885 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 8 816 - -
Bva14g01278 885 ProSiteProfiles B3 DNA-binding domain profile. 342 443 IPR003340 GO:0003677
Bva14g01278 885 Coils Coil 725 745 - -
Bva14g01278 885 MobiDBLite consensus disorder prediction 443 462 - -
Bva14g01278 885 ProSiteProfiles Zinc finger CW-type profile. 570 620 IPR011124 GO:0008270
Bva14g01278 885 MobiDBLite consensus disorder prediction 836 850 - -
Bva14g01278 885 Gene3D - 564 622 - -
Bva14g01278 885 MobiDBLite consensus disorder prediction 722 818 - -
Bva14g01278 885 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 8 816 - -
Bva14g01278 885 SUPERFAMILY DNA-binding pseudobarrel domain 339 442 IPR015300 -
Bva14g01278 885 SMART B3_2 342 443 IPR003340 GO:0003677
Bva14g01278 885 MobiDBLite consensus disorder prediction 722 737 - -
Bva14g01278 885 CDD B3_DNA 340 441 IPR003340 GO:0003677
Bva14g01278 885 Pfam CW-type Zinc Finger 575 617 IPR011124 GO:0008270
Bva14g01278 885 MobiDBLite consensus disorder prediction 836 885 - -
Bva14g01278 885 Pfam B3 DNA binding domain 342 441 IPR003340 GO:0003677
Bva14g01278 885 MobiDBLite consensus disorder prediction 440 469 - -
Bva14g01278 885 Gene3D - 320 446 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01278 Bva-Chr14 6264280 6275892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01278 9 726 B3 DNA Binding Superfamily AT4G32010 46.164 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva14g01278 B3 7.7e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01278 - - gmx:100782114 1441.79