Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01261 ATGGGTGAAAGGGGTGTTAGGGAAGCTAAAGTAGAGCAGAACTCACCGGATACGTCCACCGGAGATTCCAGTCTCCGGCGAACAATCGAGTTTATATCTTCGTTGATTTCTCTCTCCCATTCAGTCAGGGTATTTGCTGCAAAGTGGCAACTGATTCGGAGCAAACTGGAGGAGCTCCATTCTGGGTTAATCGCCGCCGAGGATTGCGATTCCGGTGAGAATCCATCACTCTCCAACTTGGTTCCTTCAATATTTGTTACCGTCAATGAGTGCTACGATCTAGCTCGTCGTTGCGTCGATCTTTCTTATAGTGGGAAGCTCCTGATGCAGAGCGATTTGGATGTGATGTTTACCAAGTTCGATCGCCATGTGAAGAAGCTCTCAGAGATATACACAACGGGTATTTTGACTCATAGGTATGCTCTCGTTGTCTCTAGACCTAGCCTTGGGGCCAGTAAAGATGATATGAGGTTCTATATGAGGGACTTGCTTACTAGAATGAAGGTTGGGGATGTGGGCATGAAAAGACAAGCTTTGATTAATCTGCACGAGGTTGTGGTTGAAGATGAGAAGTATGTGAGAGTGATTGTGGAAGTGGGTGACATTGTTCATGTTTTGGTGAATTTTCTCGATTCACCCGAGGTGGAAATCCAAGAAGAATCTGCCAAAATAGTTTCTATGGTTGCTGGTTTTGATTCCTATAAAGGAGTTTTTATCGGAGCTGGGATTATTGCGCGGTTGATTCGGGTCTTGGAAGTTGGGAATGAGGGAGGGAAGGTAGGAGCTGCAAGGTGTTTGCAGAAATTAACTGAGAATTCAGATAATGCTTGGTCAGTTTCAGCTCACGGGGGAGTCACTGCCTTGTTAAAAATATGCTCTAATGAAGACTTTAAAGGAGAATTGGTTGGCCCTGCTTGTGGGGTATTGAGAAATCTTGTGGGtgttgaagaaataaagagaTTTATGGTTGAAGAAGATGCTATTTCCACGTTTATCAAGCTTGTGAGGTCCAAGGAGGAAGCAATTCAGGTAAGTTCTATAGAGTTCCTTCAAAATATTGCCTCTGGAGATGAAATAATTAGGCAATCGGTGGCTAGAGAAGGTGGAATTCGTGTATTGTTGCGTGTTTTGGAGCCTAAATGGTCGTATTCTTCTAAAACAAGAGAGATAGCAATGAGAGCCATTGAAAATCTGTGTTTTTCTTCCACTAGTTCTGTAAGTATGTTGATGAATTATGGGTTTGTGGATCAACTTCTATATTATATTCGAAATGGGGAAGTTTCCATTCAAGAACTGGCTCTGAAAGTGGCATTTAGATTATGTGGGACATCAGAGGAAGCTAAAAAAGCAATGGGTGATGTAGGATTTATGCCTGAACTTGTTAAGTTCCTACATGCAAAATCATTTGAAGTTCGTGAAATGGCTGCTGAAGCACTAGCTGGCTTGGTTTTGGTAcctaaaaatagaaagaaatttgtgCTAGATGACCACAATATTGCCCTTCTTCTTCAATTGCTCGACCCAGAAGAGGGAAATTCAGGTAACAAAAAGTTATTGATCTCTATATTAACGTCATTAACAAATAGCAACAGTGGGAGAAAGAAGATTGTCAATTCTGGTTATGccaaaaatatagagaaacTTGCAGAATCTGAAGTTTCTTCTGATGCCAAGAGACTTGTAAAGAAGCTATCCACAAACAGGTTCCGCAGTATGTTAAGTGGAATCTGGCACCACTCATG 1742 0.4093 MGERGVREAKVEQNSPDTSTGDSSLRRTIEFISSLISLSHSVRVFAAKWQLIRSKLEELHSGLIAAEDCDSGENPSLSNLVPSIFVTVNECYDLARRCVDLSYSGKLLMQSDLDVMFTKFDRHVKKLSEIYTTGILTHRYALVVSRPSLGASKDDMRFYMRDLLTRMKVGDVGMKRQALINLHEVVVEDEKYVRVIVEVGDIVHVLVNFLDSPEVEIQEESAKIVSMVAGFDSYKGVFIGAGIIARLIRVLEVGNEGGKVGAARCLQKLTENSDNAWSVSAHGGVTALLKICSNEDFKGELVGPACGVLRNLVGVEEIKRFMVEEDAISTFIKLVRSKEEAIQVSSIEFLQNIASGDEIIRQSVAREGGIRVLLRVLEPKWSYSSKTREIAMRAIENLCFSSTSSVSMLMNYGFVDQLLYYIRNGEVSIQELALKVAFRLCGTSEEAKKAMGDVGFMPELVKFLHAKSFEVREMAAEALAGLVLVPKNRKKFVLDDHNIALLLQLLDPEEGNSGNKKLLISILTSLTNSNSGRKKIVNSGYAKNIEKLAESEVSSDAKRLVKKLSTNRFRSMLSGIWHHS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01261 580 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 283 327 IPR000225 GO:0005515
Bva14g01261 580 SMART arm_5 315 355 IPR000225 GO:0005515
Bva14g01261 580 SMART arm_5 444 484 IPR000225 GO:0005515
Bva14g01261 580 SMART arm_5 189 230 IPR000225 GO:0005515
Bva14g01261 580 SMART arm_5 357 400 IPR000225 GO:0005515
Bva14g01261 580 SMART arm_5 231 271 IPR000225 GO:0005515
Bva14g01261 580 SMART arm_5 272 314 IPR000225 GO:0005515
Bva14g01261 580 Gene3D - 160 568 IPR011989 -
Bva14g01261 580 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 578 - -
Bva14g01261 580 SUPERFAMILY ARM repeat 162 561 IPR016024 -
Bva14g01261 580 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 578 - -
Bva14g01261 580 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01261 Bva-Chr14 6163249 6165659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01261 206 436 U-box Gene Family AT3G54790 23.276 5.01e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01261 - - gmx:100809382 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01034 13 5002288 5004564 Bva14g01261 14 6163249 6165659 BWGD