Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01251 ATGGGTAGAGCACCGTGCTGTGAAAAGAGTGGCCTCAAGAAAGGGCCATGGACGCCAGAGGAAGATCAGAAACTCATTGATTATATTCAGAAACATGGCTATGGCAACTGGAGAACACTTCCTAAGAATGCTGGGTTGCAAAGGTGTGGGAAGAGTTGCCGGCTCCGGTGGACAAACTATCTCAGGCCAGATATCAAGCGTGGTCGGTTTTCTTTCGAAGAGGAGGAGACAATCATTCAACTGCATAGCATTCTGGGCAACAAGTGGTCTGCAATTGCTTCGAGGTTACCCGGAAGAACAGACAATGAAATCAAGAACTACTGGAACACCCACATTCGAAAGAGGCTTCTTAGGATGGGGATTGATCCAGTGACGCACAGTCTACGACTAGACCTTCTAGacctctcttctcttctaagCTCATCTCTTTACAGCAACTCATCACAACCCAACATTCAGAGGTTTCTCGGCATGCAGCCTCTGGTGAACCCAGAGCTTCTAAAGTTGGCTTCTTCACTGTTTCAATCTCAAAACAATCAGCAAAACCAGCTCTTCAATCCACAGATTCAGAGCCAAATCCCACACTTTGCCACCGACCCAGTTCAAGAAATCCCTGCTTCATTGCCTCTAACCGAAGCAGAAGCTCAATTAATGGTTGAACCAAATGTGGATGCTTACCAATCAAATTTCACTGATTTTGATTGGCAAGGCAATGGAATAGCTTCAAGCTCTAATACTCTGACAGAGGACTACGTGCCTCAGATTCCAAGCTACAATTTTTACAGTTCTGATAATCAGAATCTCATGTCTGAAGCCTCAAATTTCCAATATTCTAATGGCAGCAACCAGAACTTCAGCTTGGCTTCGGTGCTGTCAACGCCGTCGTCAAGCCCGACGCCGTTGAACTCGAACTCTACGTACGTGAATAGCAGCAGCACAGAGGATGACAGAGAGATCAGCTATGGCGGCCGCTGCGAcgatattttgtttgaaatccCTAATATTCTAGATGTTAACGAGTTCAtgta 1028 0.4436 MGRAPCCEKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSLRLDLLDLSSLLSSSLYSNSSQPNIQRFLGMQPLVNPELLKLASSLFQSQNNQQNQLFNPQIQSQIPHFATDPVQEIPASLPLTEAEAQLMVEPNVDAYQSNFTDFDWQGNGIASSSNTLTEDYVPQIPSYNFYSSDNQNLMSEASNFQYSNGSNQNFSLASVLSTPSSSPTPLNSNSTYVNSSSTEDDREISYGGRCDDILFEIPNILDVNEFM 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01251 342 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva14g01251 342 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bva14g01251 342 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva14g01251 342 CDD SANT 69 112 IPR001005 -
Bva14g01251 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bva14g01251 342 CDD SANT 16 61 IPR001005 -
Bva14g01251 342 PANTHER TRANSCRIPTION FACTOR MYB74 1 322 - -
Bva14g01251 342 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva14g01251 342 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 322 - -
Bva14g01251 342 MobiDBLite consensus disorder prediction 289 316 - -
Bva14g01251 342 Gene3D - 13 66 - -
Bva14g01251 342 SMART sant 66 114 IPR001005 -
Bva14g01251 342 SMART sant 13 63 IPR001005 -
Bva14g01251 342 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva14g01251 342 Gene3D - 69 116 - -
Bva14g01251 342 MobiDBLite consensus disorder prediction 289 318 - -
Bva14g01251 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01251 Bva-Chr14 6117715 6119154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01251 1 342 MYB Transcription Factor Family AT4G21440 56.000 2.28e-116 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva14g01251 Myb_DNA-binding 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01251 K09422 - gmx:102660551 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01028 13 4968977 4970739 Bva14g01251 14 6117715 6119154 BWGD