Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01249 ATGGCGGAGGAGGAGGTGGCTTTACCGGACCATCTTCGCTGCAGCCGCACTGACGGTCGACAATGGAGGTGCCGTCGAAAGGTCATGGACAACCTTAAGCTCTGTGAGATTCATTATCTTCAAGGGCGACATCGGCAATACAAGGAGAAGGTCCCGGAGTCACTGAAGCTTCAGAGAAAACCCAAAAAGGGGTTTAATTTTAGGAATGCTGAAAACGGCCCTGTTCTCAGCAATGTTGAAATTAGGGCACGGAAAGTGGGGAAGATGGCGAGGTTGTTGAAGAAGAGGCGCAAATCTTCAGATGGGTCAGAAGCATTGGATAGGAAAAAGCCCTTCAAGCAAGGTGGTGGTGATATGCAGTTGGAGTTAATTAGGATAGTGTTGAAGAGGGAGGTCgagaagagaaggaagaagcagggagagaagaagaaaagcaagaacaagaagaaggaTATTGAGATGAAGTTGGAGATGGAGATGGAGGAGGAGTTACATTACAGTGAGGAAGGGTTAACACGAGAATTGCCCAATGGGTTAATGGCAATATCTCCTGCATTGACGCCTCAAGATTGTAGCAATGTGGATTCCCCTTGTGATTTTAAAGTTGGGGTTGATCATAAAGCAATTACTCCTCGTTACTTTCGTTCCAAGAATGTTGAGAGGCTCCTAGTTGGCAAACTGCAGGCTGTACCATATGGGCGAAACCTGAAGAAGGCTAGGAGGAAGAAGTGTCACTGGTGCCAGAGAAGCGATTCTTGGAACCTTATTAAGTGCTCGAGCTGTCAAAAAGAGTATTTCTGCATGGATTGCACCAAAGAAAGGTATTTTGatactcaaaatgaagttaAGGTGGCATGTCCAGTTTGTCGAGGAACTTGCTCCTGCAAAGACTGCTTGGCAAATCGATACAAAGACAGTGAAAGTAAGGAACTTTTGTCAGGTAGAAGCAGAGTTGATAgaattttgcattttcattatttgatcTGTGTGCTCCTTCCATTgcttaaacaattaaatgaagACCAGAATGCTGAGATAGAAGCAGAAGCAAAAATGAAAGGTAAAAGACCTTCTGATGTTCACATAAAGCAGCTTGAGTTTGGCTACAATGAGCAAAGGCACTGCAATTACTGCAAAACTCCCATTTTGGATCTCCATAGAAGCTGCCCTGGTTGTTCATACAGCTTTTGCTTAAACTGTTGTCGGGAATTGTCTCAAGGCTGCATCTCTGGAGAAATTAACTCTTCAATATCTAAGTTTCCCAGTAGAAAGAAAACTTGCATTGCCAGCAGAAAGCGCTCTTTCAATAAGAAGGCCTTTTGTAATGGAAACTCAATTGCTATTTCATCATTGCCTAAGTGGACATATTATGATGGAACTGGCAGTGTATCTTGCCCACCCAAAGAGTTTGGTGGCTGTGGTGATAGCGTTCTTGATTTGATATGTGTTTTTCCAATGAGTTGGACGAAAGAGATGGAAATAACTGCTGAAGAAATAGTCTGCAGCTATGACTTTCCTGAAACTCTGGATAGAAGTTCACGCTGCTCACTGTGTCTTGACATAGATCATGACATCGATGGATTTAAACATTTGCAAGAAGCAGCTGTAAGGGAAGATTCAGATGATAACTATTTGTTTTATCCCACCCGTTTGGACATCAACAGTGATCATTTTGAACATTTTCAGAAGCACTGGGGCAGAGGCCATCCTGTGGTAGTGCGAGACGTTCTCCAAAGCACATCTAACCTCAGTTGGGATCCACTGGTCTTGTTCTGTACTTATCTTGAGAGGAGCATCACAAgatatgaaaacaataaagaatTACTTGAAACTTGTTTGGATTGGTGTGAGGTTGAAATTAACATCAGGCAGCATTTTAGGGGCTCTCTTAAAGGGTGGCAACCAAAAAGCATGTGTCATGAGGAGTTGAAATTGAAGGGATGGCTGTCTTCTCAACTATTTAAAGAGCAACTTCCAGCTCATTTTTCTGAAGTTTTTGATGCTCTCCCACTTCAAGAATACATGAATCCCACTTCTGGTCTTCTAAACTTAGCTGCAAATTTGACACAAGGGAGTGCAAAACATGACCTAGGACCACATGTCTATATTTCATATGGCTGTGCTGACAAACAAGATGATTCTGTAACAAAACTCAGTTATGACTCTTATGATGTGGTTAATATTATGGCACATACGACAGATGTTCCTCTCTCTACAGAacatcttaataaaataagaaagttgcTCAAAAAGCACAAAGCTCTGTGTGAAAAGGAATCTTCGGATATTACTAGCAATCAACTAAAGGAAAAGATTGCGAAAGGAAATTCATTGTTGCATGCCGAAGCTGTGGACCAAGCAGAAGTTCAGAGTATggatagagaagaaaaacagTGTCTCAAGAGAGTCAATCGAATGGCTAGTATCCCCAGGGAAGCAACACAAGTTGTTAGTCAGAATATTTCCAACTATGTTTCCCAGAATAGGAAATGTGGTTCTGATTCTGATACTGATTCTGATCCCTCTTTGTTTCTCCGCGCAACTGTTCAAACAACTGGAATGTCTAGAAATCATAATTACAGAAATGCCATTGAAATCTTGAATAATGAAAGAGATCAAAAATCAGCTGAGCATTCCGGTGCCCAGTGGGATGTTTTTCGCAGACAAGATGTTCCAAAGCTCATAGAATACCTCAAAAGGCACTCTGATGAATTTTCTCATGCCCTTGACTATCACGAGCAGATGGTTCATCCAATTCTAGATCAGTGCTTCTTTCTTGACAACATTCACAAAATGCGGCTCAAGGAGGAGTTTGAAATTGAACCGTGGACTTTTGAGCAGCGTGTTGGAGAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATTAGGAATCCTAAGTGTTGTGTTAGTGTAGTGCTGGAATTTCTGTCCCCTGAAAATGTTACTGAGTGTATCCAGTTGACTGATGAAGTGCGTCTGCTCCCAGAGGACCATGATGCAAAAGTAGACAAGCTAGATCAGGTGAAGAAAATGGCTCTCTACAGCATGAGTAcagcaataaaagaaatacgTGAGCTAACAAGCAAAACATG 3095 0.3987 MAEEEVALPDHLRCSRTDGRQWRCRRKVMDNLKLCEIHYLQGRHRQYKEKVPESLKLQRKPKKGFNFRNAENGPVLSNVEIRARKVGKMARLLKKRRKSSDGSEALDRKKPFKQGGGDMQLELIRIVLKREVEKRRKKQGEKKKSKNKKKDIEMKLEMEMEEELHYSEEGLTRELPNGLMAISPALTPQDCSNVDSPCDFKVGVDHKAITPRYFRSKNVERLLVGKLQAVPYGRNLKKARRKKCHWCQRSDSWNLIKCSSCQKEYFCMDCTKERYFDTQNEVKVACPVCRGTCSCKDCLANRYKDSESKELLSGRSRVDRILHFHYLICVLLPLLKQLNEDQNAEIEAEAKMKGKRPSDVHIKQLEFGYNEQRHCNYCKTPILDLHRSCPGCSYSFCLNCCRELSQGCISGEINSSISKFPSRKKTCIASRKRSFNKKAFCNGNSIAISSLPKWTYYDGTGSVSCPPKEFGGCGDSVLDLICVFPMSWTKEMEITAEEIVCSYDFPETLDRSSRCSLCLDIDHDIDGFKHLQEAAVREDSDDNYLFYPTRLDINSDHFEHFQKHWGRGHPVVVRDVLQSTSNLSWDPLVLFCTYLERSITRYENNKELLETCLDWCEVEINIRQHFRGSLKGWQPKSMCHEELKLKGWLSSQLFKEQLPAHFSEVFDALPLQEYMNPTSGLLNLAANLTQGSAKHDLGPHVYISYGCADKQDDSVTKLSYDSYDVVNIMAHTTDVPLSTEHLNKIRKLLKKHKALCEKESSDITSNQLKEKIAKGNSLLHAEAVDQAEVQSMDREEKQCLKRVNRMASIPREATQVVSQNISNYVSQNRKCGSDSDTDSDPSLFLRATVQTTGMSRNHNYRNAIEILNNERDQKSAEHSGAQWDVFRRQDVPKLIEYLKRHSDEFSHALDYHEQMVHPILDQCFFLDNIHKMRLKEEFEIEPWTFEQRVGEAVIIPAGCPYQIRNPKCCVSVVLEFLSPENVTECIQLTDEVRLLPEDHDAKVDKLDQVKKMALYSMSTAIKEIRELTSKT 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01249 1031 Gene3D Cupin 548 1002 - -
Bva14g01249 1031 CDD cupin_RmlC-like 917 976 - -
Bva14g01249 1031 Coils Coil 142 162 - -
Bva14g01249 1031 ProSiteProfiles JmjC domain profile. 677 993 IPR003347 -
Bva14g01249 1031 SUPERFAMILY Clavaminate synthase-like 557 1013 - -
Bva14g01249 1031 PANTHER PROTEIN B160 4 1030 - -
Bva14g01249 1031 ProSiteProfiles WRC domain profile. 8 54 IPR014977 -
Bva14g01249 1031 Pfam JmjC domain, hydroxylase 879 976 IPR003347 -
Bva14g01249 1031 Pfam WRC 9 50 IPR014977 -
Bva14g01249 1031 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 4 1030 IPR045109 GO:0032454|GO:0033169
Bva14g01249 1031 SMART cupin_9 658 993 IPR003347 -
Bva14g01249 1031 MobiDBLite consensus disorder prediction 96 114 - -
Bva14g01249 1031 MobiDBLite consensus disorder prediction 93 114 - -
Bva14g01249 1031 Coils Coil 857 877 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01249 Bva-Chr14 6100235 6105603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01249 9 71 GRF Transcription Factor Family AT2G22840 39.683 2.54e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bva14g01249 JmjC 2.5e-11 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01249 K15601 - gmx:100810673 1285.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01026 13 4951646 4956592 Bva14g01249 14 6100235 6105603 BWGD