Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01243 ATGTCTTGCCCAAAAGATGAATTGCAATGGCAAGTTGCATCTGAGACGGCTCCAGGCATTGGGAAACAATGCCCAACACTGCTGACCATAGCCAATGGACGTCATAGGcttgctttattatttaacaaacaCGTGGTTTCAGAGTTTCCCATTTTGCCAGATAAGAAAGTAGAAAAACGACATTATAGATTATGGGAAAGtaattcaaacaataatttaattgaaagttgGCCTGACCCAGTTTCAACATCTTTCAAAGTCTTCTCCTTAGCTACAGAAAACCCCAAGAAATTTCAGTTCAGAAACTTGTATATAGATAGAGTTCTAATATGGAAATCTAACAAGAAAATCCATCGTGTTGGAACTGTGAAAGGGAGTATGAGAATGGCctcaagaaaagataaaacagaATTGAAGAAAGTTCCATGGAGCCCTGAAGAAGATGAGAAATTGATAGCTTACATTACCAGATATGGCATTTGGAATTGGAGTCATATGCCAAAACCTGCTGGGTTGGCAAGGTCAGGGAAGAGTTGCAGGCTCCGTTGGATGAATTACCTAAGGCCAAATATCAAGCGAGGAAAATTCagcaaagaagaagaggaaaccATTATCAATTTACATACTGTCTTGGGAAACAGATGGTCAGCCATTGCAGCTAAGTTGCCTGGAAGAACagataatgaaataaagaacTATTGGCACGCCCACTTGAAAAAGCGCTTTAACTCAGTGCCAACAGAAACTATTCAATCTGAAATTGAAGCCAACCACAACTATTCTGCTGAAACAATACCCCCACTTCTCAACAGTAAGAGTTCTCTTGAATTAGATCCACAGTCAACAAGTTACTTGTGTTCATCAAGCAGTGGCACTCTGGAAGATTTTGGAAACCCAGTGATGATAGAGGAAAATGATGGTTCATATGAAACAAGAGGCAGCagcaatatatatta 956 0.3598 MSCPKDELQWQVASETAPGIGKQCPTLLTIANGRHRLALLFNKHVVSEFPILPDKKVEKRHYRLWESNSNNNLIESWPDPVSTSFKVFSLATENPKKFQFRNLYIDRVLIWKSNKKIHRVGTVKGSMRMASRKDKTELKKVPWSPEEDEKLIAYITRYGIWNWSHMPKPAGLARSGKSCRLRWMNYLRPNIKRGKFSKEEEETIINLHTVLGNRWSAIAAKLPGRTDNEIKNYWHAHLKKRFNSVPTETIQSEIEANHNYSAETIPPLLNSKSSLELDPQSTSYLCSSSSGTLEDFGNPVMIEENDGSYETRGSSNIY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01243 318 Pfam Myb-like DNA-binding domain 140 187 IPR001005 -
Bva14g01243 318 Pfam Myb-like DNA-binding domain 193 237 IPR001005 -
Bva14g01243 318 PANTHER MYB DOMAIN PROTEIN 55 134 281 - -
Bva14g01243 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 135 187 IPR017930 -
Bva14g01243 318 ProSiteProfiles Myb-like domain profile. 188 238 IPR001005 -
Bva14g01243 318 CDD SANT 142 187 IPR001005 -
Bva14g01243 318 CDD SANT 195 238 IPR001005 -
Bva14g01243 318 SMART sant 192 240 IPR001005 -
Bva14g01243 318 SMART sant 139 189 IPR001005 -
Bva14g01243 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 242 IPR017930 -
Bva14g01243 318 ProSiteProfiles Myb-like domain profile. 135 187 IPR001005 -
Bva14g01243 318 Gene3D - 195 241 - -
Bva14g01243 318 Gene3D - 131 192 - -
Bva14g01243 318 SUPERFAMILY Homeodomain-like 138 234 IPR009057 -
Bva14g01243 318 PANTHER MYB-RELATED PROTEIN 308-LIKE 134 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01243 Bva-Chr14 6072466 6075963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01243 127 242 MYB Transcription Factor Family AT5G65230 68.103 8.21e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva14g01243 Myb_DNA-binding 1.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01243 K09422 - fve:101292192 204.912