Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01238 ATGGAGAAGTGCGAGCTCTGCAACTACCCTGCCAAACTCTTCTGTGAATCAGATCAAGCTTATCTCTGCTGGGAATGCGATGCCAGGGTTCACAGTGCAAACTTCATCGTCACCAAGCATTCCAGGACTCTGCTCTGCCATGTCTGTCAATCGCTGACGCCGTGGCACGGTTCCGGGCCAAAGTTTGTGCCAACAATCTCCGTTTGCAGTCAATGCATTGCAAACGGAAATGAAAACCATGGTGATCAAAACGACGGTGACGACGAGAGAGATGATGACACGGAGAAGGACGACGACGATGATGACGATGATAGCCACGGCGGTGGCGGCGATGAAGATGACGAGGAGAATCAAGTGGTTCCATGGGCAGTAACGACACCGCCGCCACCGGTTTCGAGCTCTTCAAACAGTGCGAATTCATTCTA 425 0.52 MEKCELCNYPAKLFCESDQAYLCWECDARVHSANFIVTKHSRTLLCHVCQSLTPWHGSGPKFVPTISVCSQCIANGNENHGDQNDGDDERDDDTEKDDDDDDDDSHGGGGDEDDEENQVVPWAVTTPPPPVSSSSNSANSF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01238 141 SMART bboxneu5 1 45 IPR000315 GO:0008270
Bva14g01238 141 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Bva14g01238 141 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Bva14g01238 141 MobiDBLite consensus disorder prediction 77 141 - -
Bva14g01238 141 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 137 - -
Bva14g01238 141 CDD Bbox1_BBX-like 3 45 - -
Bva14g01238 141 MobiDBLite consensus disorder prediction 85 118 - -
Bva14g01238 141 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01238 Bva-Chr14 6059029 6060106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01238 2 131 C2C2-CO-like Transcription Factor Family AT4G27310 39.877 4.05e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva14g01238 zf-B_box 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01238 - - gmx:100306080 154.836