Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01235 ATGCTAAATTCTACGTTCCACAAACTAATCACAACAATTATGGGATTCAGTTGTTACATGTACTTGGTTAATGTTCTACTCTTACTCTCCAGCatctattttgatttgaacTCAGCCAAGTCTACCCTCACATCTGCCCAATTCATCAGAGATCCTGTAATAATAACCTCAGATAACGATGCATTTAGACTAGGATTCTTCAGCCCCAATAATACATCAAATCGCTATGTAGGAATCTGGTATCTCGATGAATCCAATGTCATCTGGGTAGCTAACAAATTTGACCCAGTTAAGGATTCTTCAGGAATTTTCACCATTTATGAAGATGGCAATCTTGTGGTATTAAATGAACTGAAACAGGTCGTTTGGTCATCAAATGTGTCAACTGTAGCATCCAATTCAACTGCACAGCTTTTAGATTCTGGAAATCTCATCCTGATAGATGGCACCACAGGAGACACTGTATGGGAGAGTTTCCAACATCCCAGTGATACAATGGTGCCAAAGATGAAACTCAGTAGTAACAAAATAACAGGTAAGAAAATGAGGGTTTCATCATGGAAAAGCCTTTCTGATCCATCCACTGGCTTCTATAGTTTAACTCTTGAAAGACTCAATGCTCCAGAACTGATTTTCTGGGTTAATGAAAGTCGTCCATATTGGAGGAGTGGTCCATGGAATGGGAAGATTTTTATCGGGTCACTTGCCATGTCAACAACTGGATGGAGTGTAGGAAATGAAGAAGATGGAAGTGTTTATCTAGTATTCAATTTTCCAGATAACTCTTCCTTTACAACGGTGGGATTGGATCCACAAGGGAAGTTCAAATTTGCTTATTGGAATAAAAGACTTgAAAACAAAGATAACAAGAGAGTCAAGAGAGTAATTATAGCAGTTGCAGTGATAGTAGGAACCATTGCCTTAGCTGCCTGTGCATATCTCTCATGGAAATTGACTGCTAAACAAACAGgaagcagaaaaaaaatgattaaggACAAGACACAAGTTAAACTGGAAGAGCTGCCAttagtttcttttgaaaaGCTTGCAACTGCTACAAACAATTTTCACTCAAGTAATATGCTTGGGCGGGGAGGTTTCGGTGTAGTATACAAGGGAAAATTGCAAGATGGACAGGAAATAGCAGTTAAAATGCTCTCAAGAGCATCAGTACAGGGGCTAGAGCAGTTTATGAATGAGGTAGCAGTTATTTCCAAGCTTCAACATCGTAACCTTATAAAACTTATCGGTTGCTGTGCTGAAGGAGAGGAAAAGATGTTGATTTATGAGTTCATGCCAAATAAAAGTTTGGATACATTTCTCTTTGacCCAATCCAAAAAAGTGTTTTAGATTGGAGAAAACGCTATGACATTATTGAAGGAGTAGCTCGTGGTTTACTTTACCTCCATAAAGATTCTAGATTAAAAATCATACACAGAGATCTTAAGGCAAGTAACATCTTGCTAGACGGACAGATGAATCcaaaaatatcagattttggTTTAGCAAGAATTTTCAAAGATAATGAAGATCAAGTTAATACTAGAAGAGTCATGGGAACATaTGGATATATGCCTCCCGAATATGCAATGAAAGGATTGTTTTCAGAAAAATCAGACGTTTATAGCTTTGGCGTTTTGTTACTGGAGATTGttaatggaaaaagaaatactagCTTCTATGACAACGAGGAAACTCTCAGCCTCGTAGAATTTGCATGGAAACTATGGAATGAAGACAACATCATATCCTTGATTGATCAAGACATAGCTAATTCGGGCTATGAGAATCAGATTTTAAGGTGTATACAGATAGGACTTCTATGTGTGCAAGAAGTTGCAAGAGAAAGGCCAACTATGACTGCTGTTGTTTCAATGCTTAGCAATGAGAGTGTGAATCTTCCTCCTCCAAGGCAAGTTGCATTTATCCCACCACGGAAAAATTTATGGAGTGAAGAGTCCCAACAACCATACTCAATCAACAGTGTGACTGTTACTGATATGCAAGGCAGATA 2015 0.3672 MLNSTFHKLITTIMGFSCYMYLVNVLLLLSSIYFDLNSAKSTLTSAQFIRDPVIITSDNDAFRLGFFSPNNTSNRYVGIWYLDESNVIWVANKFDPVKDSSGIFTIYEDGNLVVLNELKQVVWSSNVSTVASNSTAQLLDSGNLILIDGTTGDTVWESFQHPSDTMVPKMKLSSNKITGKKMRVSSWKSLSDPSTGFYSLTLERLNAPELIFWVNESRPYWRSGPWNGKIFIGSLAMSTTGWSVGNEEDGSVYLVFNFPDNSSFTTVGLDPQGKFKFAYWNKRLENKDNKRVKRVIIAVAVIVGTIALAACAYLSWKLTAKQTGSRKKMIKDKTQVKLEELPLVSFEKLATATNNFHSSNMLGRGGFGVVYKGKLQDGQEIAVKMLSRASVQGLEQFMNEVAVISKLQHRNLIKLIGCCAEGEEKMLIYEFMPNKSLDTFLFDPIQKSVLDWRKRYDIIEGVARGLLYLHKDSRLKIIHRDLKASNILLDGQMNPKISDFGLARIFKDNEDQVNTRRVMGTYGYMPPEYAMKGLFSEKSDVYSFGVLLLEIVNGKRNTSFYDNEETLSLVEFAWKLWNEDNIISLIDQDIANSGYENQILRCIQIGLLCVQEVARERPTMTAVVSMLSNESVNLPPPRQVAFIPPRKNLWSEESQQPYSINSVTVTDMQGR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01235 671 SMART serkin_6 356 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01235 671 SUPERFAMILY Protein kinase-like (PK-like) 342 663 IPR011009 -
Bva14g01235 671 SMART blect_4 46 162 IPR001480 -
Bva14g01235 671 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Bva14g01235 671 ProSiteProfiles Bulb-type lectin domain profile. 40 159 IPR001480 -
Bva14g01235 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 282 - -
Bva14g01235 671 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 291 670 - -
Bva14g01235 671 Gene3D Transferase(Phosphotransferase) domain 1 432 634 - -
Bva14g01235 671 Pfam D-mannose binding lectin 87 188 IPR001480 -
Bva14g01235 671 Pfam Protein tyrosine and serine/threonine kinase 358 627 IPR001245 GO:0004672|GO:0006468
Bva14g01235 671 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 193 IPR036426 -
Bva14g01235 671 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 31 282 - -
Bva14g01235 671 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 291 670 - -
Bva14g01235 671 Gene3D Phosphorylase Kinase; domain 1 329 431 - -
Bva14g01235 671 Pfam S-locus glycoprotein domain 221 285 IPR000858 GO:0048544
Bva14g01235 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Bva14g01235 671 ProSiteProfiles Protein kinase domain profile. 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01235 671 CDD STKc_IRAK 362 627 - -
Bva14g01235 671 Gene3D - 35 160 IPR036426 -
Bva14g01235 671 CDD B_lectin 55 162 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01235 Bva-Chr14 6033750 6037533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01235 345 671 Receptor kinase-like Gene Family AT4G11530 54.464 6.91e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva14g01235 PK_Tyr_Ser-Thr 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01235 - - gmx:100786846 512.686