Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01200 ATGGACAGCCACGGAAACCTAATCATCCTCGAAACTCAAACCCGAAATGCTAAACCTATTTGGTCTGCTAAACTTTTGGTTCCACTTTTGTCTCCAAATGCCTCGGGAAAGCTTCTAGATACTGgcaatttcattttggttcATGATGAAAGCCAAAATGTTCTATGGCAGAGTTTTGATTACCCTACCAATACTTTTCTTCCATACATGAAACTTGGGTTGAACCGGAAAACCGGGTTAGACCGATTTCTAACATCCTGGAAATCTTCAAATGACCCAGGAACTGGCAACTTCACCTACAGGATTGATCCCTCCGGTGTTcctcaatttttcttgtataagAATGGGGCTCCACTTTGGAGGGTCGGATCTTGGACCGGTCAAAGATGGAGCGGTGTGCCTCAGATGCATGACCACCACTTCATAATCAACGCTACTTATGTTAACAATGCCGATGAGGTTACTATAATGAATGTTGTCACTGACCCTACGGTTTTCTTAACTATGGTGGTGGACCATACCGGACACATGACACGATCCACATGGCATGctcaagaacataaatggATACAATTCTGGTATGACCCGAAAGAGGATTGTGACAACTTCAATCGGTGTGGGGCAAATGGTTTTTGCGACCCGTATATTGCGGATAAGCCAGAGTGCGGGTGTTTGCCCGGGTTTGAAACCAAGTACCCACGAAAATGGTCCCTCGGAGATGAGTCAGGTGGGTGTGTAAGAAATCATAACGTCTCCACGTGTCAAAGTGGGGAGGGATTTGTTCTGGTGGCACGTGTAAAGACACCAGATACCTCAAAAGCACGTGTGGATGCAAGTTTGAACTTGAAAGCATGTGGAGAGAAGTGCTTGAAAGATTGTTCATGTGTAGCTTATACCACTGCTAATGAGAGCTCAGGGAGTGGGTGTTTGACGTGGCACGGAGATATGGGGGATACAAGAAGATACGCACGTGTGGGACAAGATTTATACATACGTGTGGATGCACGTGAATTAgCTAAATATGCAAACAAACAACATGGTAGTCTCAGCAAGAAGGGGATGATAGCAATTATAGTGGTGTCTACTCTTCTGGTCATGCTTCTCATCATGGTGTATATTGTATCTTGGTTCgtaaagaaacagaaacaagCAAGGAGAAAGCATAGCAAATATCCATCAACTACTGATTTTCAAGACTCTGCAAGCATAAAAGACCTTGAAAGCAGACAAAGTTTAGATTTACCATTCTTTGATCTAAGCGACATTGCTGTAGCAACAAACAGATTTTCTCCGGATAACTTGCTTGGACAAGGTGGTTTCGGTTCTGTTTACAAGGGTGTATTAAGTAATGGAATGGCAATAGCAGTGAAGAAACTGTCAATTTCTTCTGGACAAGGCATCGAAGAGTTTAAGAATGAGGTTGCTTTAATCGCGAAACTCCAACACAGGAACCTGGTTAGGATATTAGGTTACTGCATTCAAGGACAAGAGAAGATGTTGATATATGAGTATTTGCCTAACAAAAGCTTGGACTCTTACATTTTCGATAAATCAAAAAGGTTACAGCTAGACTGGAAGAAACGAAAGAATAGTGGTCATAATGATGACATTACCTCCTCCACTTTGGTTGGACATatatggGATCTATGGAGTGAAGGCAGAGCCATGGAGATTGTTGACCCATCATTGGGTGACACGTGCCTTGATCATGAAGTCCTAAGATGCATCCAAATTGGGCTTCTATGTGTTCAAGATTATCCCAAAGAGAGGCCAACTATATCAGTAGTTATTTCTATGTTGGATAACTATACAAATCTTGCTACTCCCAAACAACCAGTATTCAGTTTCACGAGAACTACTCACTATACTGGAATTAATTCAGTAAATGGGATGAGTATCACTGTGATGGAAGGCCGCTG 1919 0.4096 MDSHGNLIILETQTRNAKPIWSAKLLVPLLSPNASGKLLDTGNFILVHDESQNVLWQSFDYPTNTFLPYMKLGLNRKTGLDRFLTSWKSSNDPGTGNFTYRIDPSGVPQFFLYKNGAPLWRVGSWTGQRWSGVPQMHDHHFIINATYVNNADEVTIMNVVTDPTVFLTMVVDHTGHMTRSTWHAQEHKWIQFWYDPKEDCDNFNRCGANGFCDPYIADKPECGCLPGFETKYPRKWSLGDESGGCVRNHNVSTCQSGEGFVLVARVKTPDTSKARVDASLNLKACGEKCLKDCSCVAYTTANESSGSGCLTWHGDMGDTRRYARVGQDLYIRVDARELAKYANKQHGSLSKKGMIAIIVVSTLLVMLLIMVYIVSWFVKKQKQARRKHSKYPSTTDFQDSASIKDLESRQSLDLPFFDLSDIAVATNRFSPDNLLGQGGFGSVYKGVLSNGMAIAVKKLSISSGQGIEEFKNEVALIAKLQHRNLVRILGYCIQGQEKMLIYEYLPNKSLDSYIFDKSKRLQLDWKKRKNSGHNDDITSSTLVGHIWDLWSEGRAMEIVDPSLGDTCLDHEVLRCIQIGLLCVQDYPKERPTISVVISMLDNYTNLATPKQPVFSFTRTTHYTGINSVNGMSITVMEGR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01200 639 ProSitePatterns Protein kinases ATP-binding region signature. 435 458 IPR017441 GO:0005524
Bva14g01200 639 Pfam Protein tyrosine and serine/threonine kinase 433 525 IPR001245 GO:0004672|GO:0006468
Bva14g01200 639 ProSiteProfiles Protein kinase domain profile. 429 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g01200 639 Gene3D Transferase(Phosphotransferase) domain 1 526 613 - -
Bva14g01200 639 ProSiteProfiles PAN/Apple domain profile. 254 334 IPR003609 -
Bva14g01200 639 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 529 - -
Bva14g01200 639 Pfam PAN-like domain 254 318 IPR003609 -
Bva14g01200 639 CDD PAN_AP_plant 252 333 - -
Bva14g01200 639 ProSiteProfiles Bulb-type lectin domain profile. 1 59 IPR001480 -
Bva14g01200 639 Pfam S-locus glycoprotein domain 120 231 IPR000858 GO:0048544
Bva14g01200 639 SUPERFAMILY Protein kinase-like (PK-like) 419 611 IPR011009 -
Bva14g01200 639 Gene3D - 1 141 - -
Bva14g01200 639 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 93 IPR036426 -
Bva14g01200 639 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 528 634 - -
Bva14g01200 639 SMART ntp_6 255 333 IPR003609 -
Bva14g01200 639 Gene3D Phosphorylase Kinase; domain 1 390 504 - -
Bva14g01200 639 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 20 529 - -
Bva14g01200 639 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 528 634 - -
Bva14g01200 639 CDD TM_EGFR-like 350 390 - -
Bva14g01200 639 Pfam D-mannose binding lectin 2 88 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01200 Bva-Chr14 5824750 5828441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01200 528 619 Receptor kinase-like Gene Family AT4G23190 40.625 4.03e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva14g01200 PK_Tyr_Ser-Thr 4.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01200 - - gmx:100812814 712.22