Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01199 ATGGCGACTCAGCTCCCGGACCACTTCAAGTGTCCGATTTCGCTAGAGATAATGTCCGACCCGGTTATCCTCTCGTCGGGTCACACCTTCGACCGGGCCTCGATCCAAAGATGGCTGGACGCCGGTCACCGGACCTGTCCAATTACCAAATTGCCCCTACCGGAACACCCTTCCCTCATCCCCAACCACGCACTCAGGAGCTTGATTTCAAACTACGCTCACATTTCCCCTCTGAAACATCACCCTTCTCCTCAACCTGAAACCCTAATCTCCACTCTTCTGTCCCGTTCATCATCCCTCGACTCCAAAGTCGAGTCACTGCGCCAGCTCACCCGGCTGGCTCAACGCGACTCGGTGTTCCGGCGCCGGTTGACCGAGTCAGGGGTGGTGTCGGCAGTGCTCAACTGTGTTGACTCGGATGATCCTTGTCTTCAAGAGAAAGCTCTGTCCTTGCTGCTGAATCTTAGTCTCGACGACGATAACAAGGTGGGTTTAGTGGCTGAGGGCGTAATTGGTCGTGTTGTGGCGGTTTTGCTAGGTGGGTCCCCGGACTGTCGAGCGGTGGCGGCAACTATGCTGACGAGTTTGGCGGTTGTGGAAGTCAACAGGGTCACAATTGGTCGGTACCCTTATGTAATAGGAGCTTTGGTTTCGCTTCTCATAGATGGTAAAggtagagaaaagaaagaagctgcTACAGCACTATATGCTATTTGCTCTTTTCCTGATAATCGTAGAAGAGCTGTGGAATGTGGGGCTGTCCCAATTTTGCTTAGAACTGCTGATTCCGGGCTTGAAAGAGCCGTTGAAGTACTGGGTATTTTGGCTAAGTGTAAGGAAGGTAGGGAGCAAATGGAAATGTATCCTGGGTGTATAAAGATTCTAGTTAGGGTATTGAAGAATGGTAGCTCTAGAGGAGTTCAATATGCCCTGTTGGCAGTCAACTCCCTTTGTTGTTATAGTGAAGATATGAGCCTAGAGGCTATAAAAGAAGGGGTTTTGGGGATATGTATGGGATTTCTGGAGGatgataatgagaaaataagGAGAAATTCTTCAAGTTTGATTCAGGTTCTTGGTGGCAACCATGCAATGAGCtg 1100 0.4836 MATQLPDHFKCPISLEIMSDPVILSSGHTFDRASIQRWLDAGHRTCPITKLPLPEHPSLIPNHALRSLISNYAHISPLKHHPSPQPETLISTLLSRSSSLDSKVESLRQLTRLAQRDSVFRRRLTESGVVSAVLNCVDSDDPCLQEKALSLLLNLSLDDDNKVGLVAEGVIGRVVAVLLGGSPDCRAVAATMLTSLAVVEVNRVTIGRYPYVIGALVSLLIDGKGREKKEAATALYAICSFPDNRRRAVECGAVPILLRTADSGLERAVEVLGILAKCKEGREQMEMYPGCIKILVRVLKNGSSRGVQYALLAVNSLCCYSEDMSLEAIKEGVLGICMGFLEDDNEKIRRNSSSLIQVLGGNHAMS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01199 366 PANTHER U BOX DOMAIN-CONTAINING 1 360 - -
Bva14g01199 366 SUPERFAMILY ARM repeat 87 361 IPR016024 -
Bva14g01199 366 Pfam U-box domain 6 72 IPR003613 GO:0004842|GO:0016567
Bva14g01199 366 Gene3D - 265 360 IPR011989 -
Bva14g01199 366 Gene3D - 86 264 IPR011989 -
Bva14g01199 366 SMART Ubox_2 8 72 IPR003613 GO:0004842|GO:0016567
Bva14g01199 366 CDD RING-Ubox_PUB 9 50 IPR045210 -
Bva14g01199 366 SUPERFAMILY RING/U-box 3 73 - -
Bva14g01199 366 SMART arm_5 278 319 IPR000225 GO:0005515
Bva14g01199 366 SMART arm_5 241 277 IPR000225 GO:0005515
Bva14g01199 366 SMART arm_5 158 198 IPR000225 GO:0005515
Bva14g01199 366 SMART arm_5 117 157 IPR000225 GO:0005515
Bva14g01199 366 ProSiteProfiles U-box domain profile. 4 79 IPR003613 GO:0004842|GO:0016567
Bva14g01199 366 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 8 1 360 - -
Bva14g01199 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 77 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01199 Bva-Chr14 5818227 5819618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01199 1 361 U-box Gene Family AT4G21350 63.144 3.80e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01199 - - zju:107421885 548.51