Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01197 ATGGCAGAGGAGTTTCAAGCAGGGATTTGTGGTGGGAATTGGTGGAATAGTATTAACTCAACAAGAGCTATATTCCCTCTGAGCTCATCATCACCATGTTCCATGGCAGCAAATGATGCAGGGAGCTATAGCACTTGGCAAACTGAGTTTGTGGATTTAAAGCCTGGTGCTGCAAGGTCTTGTGCTGCTGAGGAGACTCATACTAACTTGGTTTCTTCTGATACCTCTCTGGGTTTTCTGGATTTGCAGAAGCCACAACAGAGTGAATCAGCAAGTGGTAGTGGTAGCATCTTGATTGATTCCACCTTGCAAATGATGGGTTTTGGCCTATCTTCACCATCAACTTCATCATCTGATTGGAATCATTCTCTGCTCAGTGGAAGACCAGAGAGGAATTTCCATTCTTTGCTTCAAGAAGAAACGGTTATGGATTCATCTCCACAAGCAAAGAGCTTCTCATCTTGTGGAGGAGCTCAAGTTTCCACCATTAATGATTCATTGAAGCCAATGAACCAAGAATTTCCTTTAGATCAGCAAAATCTGAGTTCTGGGTCTTCAACAGTGACTTTCCCAATTGGTAATTCAGCTTCATATGGGTTTCCTTCAAGTTTGATGCAAAGTCTATATGAGCCTGAGACTCATCATCAGCAACAACCACAGCATTCACTTTTCACCAACCGGTCTATGGCTTATTCATCATCAACAGGAAACTATGTCACAAACTCGTCCAATGACCTTTCACCTACTTGGTCTAATAAAGTCTCTTCCCTTTTGAAGCCAAAGCAACATCTTAGTGGGCTGCACTTTTCCAACAATACTCCTTTCTGGAATGCTTCTGCTGATGCATTCGCCGACTTAAGAACCGGCGTTTTCGGTTCATCACAACCTCAATATAATCATCAAACTCCAAAATTTGATGAGAAGCATAATAGCCCAAATCTCATAACCAAGGCCAAGATTGAAGAAGCTGTTCCAGACTCAGCTTCCGCGGTCAAGAAGAATAGTGCTTATGAACCTGCATTCAAAAGGCCAAGAATTGAAACTCCATCACCATTACCAACTTTTAAGGTTCGGAAAGAGAAGCTGGGGGACCGAATCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACTGATACTGCTTCTGTGCTCCACGAAGCCATTGAGTACATCAAGTTCCTTCATGATCAAGTCAATGTTTTGAGTACTCCATACTTGAAAAATGGAGCTCCCATCCAACTCCAGCAGGACACAGAAGGATCAAAACAAGATTTGAGAAGCCGAGGGCTATGCTTGGTGCCAATTTCAAGCACAGTCCCAGTAGCAAATGAGACCACTGCAGATTTCTGGACGCCTACATTTGGAGGCGCACTCATCagata 1385 0.4325 MAEEFQAGICGGNWWNSINSTRAIFPLSSSSPCSMAANDAGSYSTWQTEFVDLKPGAARSCAAEETHTNLVSSDTSLGFLDLQKPQQSESASGSGSILIDSTLQMMGFGLSSPSTSSSDWNHSLLGRPERNFHSLLQEETVMDSSPQAKSFSSCGGAQVSTINDSLKPMNQEFPLDQQNLSSGSSTVTFPIGNSASYGFPSSLMQSLYEPETHHQQQPQHSLFTNRSMAYSSSTGNYVTNSSNDLSPTWSNKVSSLLKPKQHLSGLHFSNNTPFWNASADAFADLRTGVFGSSQPQYNHQTPKFDEKHNSPNLITKAKIEEAVPDSASAVKKNSAYEPAFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTPYLKNGAPIQLQQDTEGSKQDLRSRGLCLVPISSTVPVANETTADFWTPTFGGALIR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01197 460 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 394 IPR011598 GO:0046983
Bva14g01197 460 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 65 448 - -
Bva14g01197 460 PANTHER TRANSCRIPTION FACTOR BHLH123 65 448 - -
Bva14g01197 460 CDD bHLH_AtbHLH_like 351 402 IPR045239 -
Bva14g01197 460 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 355 409 IPR036638 GO:0046983
Bva14g01197 460 Gene3D - 355 410 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01197 Bva-Chr14 5799069 5802123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01197 1 460 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 38.066 1.38e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01197 - - gmx:100794682 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01009 13 4850913 4854110 Bva14g01197 14 5799069 5802123 BWGD