Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01188 ATGGATGGTACCAGCAGGGGAAGGTTGGGAAGGAATAGGTCTTATGGTGATGACACAGTCTTCAAATCAAAGAATCTTGACACTGAAAGGAGGAGAAGGGCCAAGCTCAGTGACCGCCTCTTGACTTTGCGAGCTTTGGTTCCCATAATCACAAATATGAACAAGGCAACCATTATCATCGATGCCATCACCTATATCAAGCAGCTGCAAGGTGAAGTTGACAGTCTTACCCGTGAGCTCGAAGAATTGGAAGCAACTGAGGAAATAGTAGAGCCAAAGTTTAATGAGGTTGATGCTGCACAACAGATGCATAAATGTGGAATACAGCCAGAAGTGACTGTGACCCAAATTGATGGGAACAAGCTATGGATCAAGATCGTTTTCGAGAAGAAAAAGGGTAGATTCAAGAAGTTGATTGAGACCATGAATGCTTTCGGAATTGAACTCATGGACACTAATGCTACTACCACAAAAGGAGCTTTTCTGATCACATCCTGCATACGGGGTAAGCATGGCGAGCAACTTGAAGCTCAGCAAACAAAGGAGTTGCTGATAGACATTATAAATGCCATGTA 575 0.4348 MDGTSRGRLGRNRSYGDDTVFKSKNLDTERRRRAKLSDRLLTLRALVPIITNMNKATIIIDAITYIKQLQGEVDSLTRELEELEATEEIVEPKFNEVDAAQQMHKCGIQPEVTVTQIDGNKLWIKIVFEKKKGRFKKLIETMNAFGIELMDTNATTTKGAFLITSCIRGKHGEQLEAQQTKELLIDIINAM 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01188 191 Pfam Helix-loop-helix DNA-binding domain 27 70 IPR011598 GO:0046983
Bva14g01188 191 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 10 190 - -
Bva14g01188 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 20 69 IPR011598 GO:0046983
Bva14g01188 191 Gene3D - 17 100 IPR036638 GO:0046983
Bva14g01188 191 Coils Coil 66 86 - -
Bva14g01188 191 PANTHER TRANSCRIPTION FACTOR DYT1 10 190 - -
Bva14g01188 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 86 IPR036638 GO:0046983
Bva14g01188 191 SMART finulus 26 75 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01188 Bva-Chr14 5769361 5772455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01188 17 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 39.344 7.41e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva14g01188 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01188 - - qsu:111988971 227.254