Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01170 ATGTCAGGCAACCAACCGGAGATGAATTCTCCGGAAAATCCCAATTGGGTATTCGATTATGGTCTCATAGTGGACATTCCCGTCCCTGGTGGTGACCTTCCTTCCCTTGACCCACCAAATTTTTCATGGCCATCTCATCATCCTCTGACTACTCCTGCTCCTAATCTCAGTGTggagttagatgattcttgtgGAGTTTCAGATGGCTTTACAGAGAATGGCTCTAGAAAACGCATGAGGCCTGCATCCTGCAACACATCTGGTTCCAAAgcatgcaaagaaaaaatgcgAAGGGATCGACTAAATGAGAGGTTCCTGGAACTGGGTTCTATCCTGGACCCTGGAAGGCCTCCCAAAATGGACAAGGCTGTTATATTAAGTGATGCAGTTCGAATGGTGTCCCAGTTACGAGAGgaggctcaaaagcttaaaGAATCTAATGATAATCTGCAGGAGAAAATAAACGAATTGAAGTCTGAGAAGAATGAGCTCCGCGATGAGAAGCAGCGGCTGAAAGTGGAGAAAGAGAACCTTGAGCAGCAAGTTAAAGCTCTCAGTTCACAACCAGGCTTCCTGCCCCACCCAACCACCATTCCAGCTCCGTTTCCGGCACCAGGGCAAGTTGTTGGGGGCAAGCTGGTGCCATTCATGGGTTACCCAGGAGTTTCCATGTGGCAGTTTTTGCCACCTGCCGCCGTTGATACCTCACAGGACCATGTCCTTCGACCCCCAGTTGCATA 740 0.4568 MSGNQPEMNSPENPNWVFDYGLIVDIPVPGGDLPSLDPPNFSWPSHHPLTTPAPNLSVELDDSCGVSDGFTENGSRKRMRPASCNTSGSKACKEKMRRDRLNERFLELGSILDPGRPPKMDKAVILSDAVRMVSQLREEAQKLKESNDNLQEKINELKSEKNELRDEKQRLKVEKENLEQQVKALSSQPGFLPHPTTIPAPFPAPGQVVGGKLVPFMGYPGVSMWQFLPPAAVDTSQDHVLRPPVA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01170 246 Pfam Helix-loop-helix DNA-binding domain 89 136 IPR011598 GO:0046983
Bva14g01170 246 SMART finulus 91 142 IPR011598 GO:0046983
Bva14g01170 246 PANTHER BHLH TRANSCRIPTION FACTOR 9 246 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bva14g01170 246 CDD bHLH_AtILR3_like 90 165 - -
Bva14g01170 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 85 136 IPR011598 GO:0046983
Bva14g01170 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 161 IPR036638 GO:0046983
Bva14g01170 246 Coils Coil 126 188 - -
Bva14g01170 246 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 9 246 - -
Bva14g01170 246 Gene3D arf6 gtpase in complex with a specific effector, jip4 135 188 - -
Bva14g01170 246 Gene3D - 75 134 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01170 Bva-Chr14 5690316 5692765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01170 8 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 58.921 1.11e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva14g01170 HLH 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01170 - - mnt:21402686 372.859