Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01145 ATGGAGATTTCATCAGCCAGAGGGTTATCTGAACTGGAAATGGAGGATCCTATTAATTTTCTCCATCAATGGCACTTGAGCTTTCTAGACGACCCTAGCTTGCTGCCAATAGCAGCTGCAGCTTTTGAAGAGAGCTTACAACAACACTCATTCTCTAGCAGCCCAGACTTGATCAATTCCGAAACTTGCATGGAAACTTCACTTATTGGTATTGAAAGACCCACAAAACAACACAAACCCAATAATTGGGGTTCCAATTATAGCGATCAGTCATCAAACCCACAATTTGCTGCTGCTTCTCCAaatgttctttctttcaattcaaattacatAAACCAAATGGGAGTTATGAATACTGAGGAGATTGCATGTGCTAAAGTAAATGGTACAGTTCCTTCTGACGTTTTGACTTCTAAGGGATCGTTGGGAAACCAAAACTATAGGTTCAATGCCTGTGAAGGGGCACAAAAGATTAGCACAAGTCCCAAACTTTCTCAACCAGTGCAAGACCATATAATAGCTGAAAGGAAGCGGCGAGAGAAGCTTAGCCAGCGGTTCATTGCTTTATCTGCTCTTGTTCCTGGCCTAAAGAAGATGGATAAAGCTTCTGTTCTTGGAGATGCAATCAAATACTTGAAGCAACTGCAAGAGAAAGTCAAGGCCCTTGAGGAGGAACAGACTAGGGCAAAATCAATGGAATCTGTGGTAATTGTGAAGAAATGTCGACTAGTTGATGATGCTGATGACTCTTCCTCAGACACTAGCGGTTCATTAGATGAGCCTCTACCTGAAATTGAGGCTAGATTCTGTGGCAGAAATGTGCTCATACGAATTCACtgtgagaaaaggaaaggagttGTTGAGAAAACAATGGCTGAAATTGAGAAACTCCATCTGATAATCACCAATAGCAATGTTATGACTTTTGGGAGTTCTGCCCTTGACATAACAATTGTTGCTCAGATGGATCTGGAGTTCTGCATGACAGTGAAGGATCTTGTAAGAAGTCTACGCTCAACCTTAGTATCTTTCATGTG 1037 0.4012 MEISSARGLSELEMEDPINFLHQWHLSFLDDPSLLPIAAAAFEESLQQHSFSSSPDLINSETCMETSLIGIERPTKQHKPNNWGSNYSDQSSNPQFAAASPNVLSFNSNYINQMGVMNTEEIACAKVNGTVPSDVLTSKGSLGNQNYRFNACEGAQKISTSPKLSQPVQDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYLKQLQEKVKALEEEQTRAKSMESVVIVKKCRLVDDADDSSSDTSGSLDEPLPEIEARFCGRNVLIRIHCEKRKGVVEKTMAEIEKLHLIITNSNVMTFGSSALDITIVAQMDLEFCMTVKDLVRSLRSTLVSFM 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01145 345 MobiDBLite consensus disorder prediction 78 94 - -
Bva14g01145 345 CDD bHLH_AtNAI1_like 169 240 - -
Bva14g01145 345 PANTHER BHLH TRANSCRIPTION FACTOR 2 344 - -
Bva14g01145 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 229 IPR036638 GO:0046983
Bva14g01145 345 MobiDBLite consensus disorder prediction 72 94 - -
Bva14g01145 345 Coils Coil 205 232 - -
Bva14g01145 345 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 2 344 - -
Bva14g01145 345 Gene3D - 165 237 IPR036638 GO:0046983
Bva14g01145 345 SMART finulus 172 221 IPR011598 GO:0046983
Bva14g01145 345 Pfam Helix-loop-helix DNA-binding domain 170 216 IPR011598 GO:0046983
Bva14g01145 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 215 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01145 Bva-Chr14 5578279 5580379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01145 1 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.808 6.19e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva14g01145 HLH 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01145 - - aprc:113852973 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00972 13 4677011 4678923 Bva14g01145 14 5578279 5580379 BWGD
Bva14g01145 14 5578279 5580379 Bva14g01145 14 5578279 5580379 ECH