Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01107 ATGGATATAGTGAATCCGCAGCCACTGCAAGCAAGGCCCTTCGATGATGGAGAGCTTCAACCGGTACAGGTTCCCATGCATGTGGATGGGGTCGAAGGTGGAGTAAACACCCAATATGTCATTGGAGGTTTTGACATGGTCAGCAATGGAGTAGAAGAAGCTAGAGTGAGTTCTGGGTTATCTGGGGCAAATGGTTGTTCTGCGCAGTCTCGGACCAGTGAGCTCACCATTGCCTTTGAAGGAGAGGTCTACGTTTTCCCTGCAGTTACCCCCGAAAAgGTGCAGGCTGTGTTATTACTCTTGGGAGGTCATGAGATGTCCAATGGTGTCCCCAGCACTGAGATTCTGCAGCAACAGGATATGAGGGGAATAAATGATCCTTCACGAGGTTCAAAGCTTTCACGGAGAATTGCATCCCTTGTTAGGTTCCGTGAGAAGCGGAAAGAGAGATGCTTTGAGAAGAAAATTCGGTATACATGCCGTAAAGAAGTCGCTCAGAGGATGCATCGCAAGAATGGACAATTTGCATCACTGAAGGAATGCTACAACCCTGCTGGTGAAAACTGGGACTCAAACAGTAGTGCTCCTTGTCCAGAATCTACTGAACGTAGATGTCAGCATTGTGGAATTAGCGAGAAGTCTACTCCAGCTATGCGTCGAGGACCGGCTGGTCCGAGATCTCTGTGCAATGCATGTGGGCTTATGTGGGCAAATAAGGGAACTCTGAGAGATCTCACTAAATCAGGACGGGTCTCAACATTTGAACAAAATGATCTGGATTCTTCAACAGATATAAAGCCTTCAACAACAGAACCAGAAAATTCTTGTCCTGACCAAGATGAAGTGGGAAGCCCAGAGGAGAATAAGTATGAACAACTAGATTCCGGGCAGTCATCAAAGAGGACAAATGGGCAGTGTATTCTCGAAACTGACAACAACGACTTACCCATCCAAGTGGAGAATCCTGTGATGGATCTACATGATCAGGAGACTCTTGACGATCTTGCCGATGCTTCTGGGACAGAATTTGAGATTCCTGCTGGTTTTGATGAGCAGGTTGACATTGATGCTTCCAACATGAGAACTTACTGGCTCTG 1097 0.4686 MDIVNPQPLQARPFDDGELQPVQVPMHVDGVEGGVNTQYVIGGFDMVSNGVEEARVSSGLSGANGCSAQSRTSELTIAFEGEVYVFPAVTPEKVQAVLLLLGGHEMSNGVPSTEILQQQDMRGINDPSRGSKLSRRIASLVRFREKRKERCFEKKIRYTCRKEVAQRMHRKNGQFASLKECYNPAGENWDSNSSAPCPESTERRCQHCGISEKSTPAMRRGPAGPRSLCNACGLMWANKGTLRDLTKSGRVSTFEQNDLDSSTDIKPSTTEPENSCPDQDEVGSPEENKYEQLDSGQSSKRTNGQCILETDNNDLPIQVENPVMDLHDQETLDDLADASGTEFEIPAGFDEQVDIDASNMRTYWL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01107 365 MobiDBLite consensus disorder prediction 290 304 - -
Bva14g01107 365 PANTHER GATA TRANSCRIPTION FACTOR 28 ISOFORM X1 1 356 - -
Bva14g01107 365 SMART GATA_3 199 252 IPR000679 GO:0006355|GO:0043565
Bva14g01107 365 Pfam CCT motif 136 177 IPR010402 GO:0005515
Bva14g01107 365 Pfam tify domain 70 102 IPR010399 -
Bva14g01107 365 ProSiteProfiles GATA-type zinc finger domain profile. 199 255 IPR000679 GO:0006355|GO:0043565
Bva14g01107 365 ProSiteProfiles CCT domain profile. 136 178 IPR010402 GO:0005515
Bva14g01107 365 Pfam GATA zinc finger 205 241 IPR000679 GO:0006355|GO:0043565
Bva14g01107 365 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 201 254 - -
Bva14g01107 365 Gene3D - 198 257 IPR013088 GO:0006355|GO:0008270
Bva14g01107 365 ProSitePatterns GATA-type zinc finger domain. 205 232 IPR000679 GO:0006355|GO:0043565
Bva14g01107 365 SMART tify_2 68 103 IPR010399 -
Bva14g01107 365 MobiDBLite consensus disorder prediction 253 277 - -
Bva14g01107 365 CDD ZnF_GATA 204 247 IPR000679 GO:0006355|GO:0043565
Bva14g01107 365 MobiDBLite consensus disorder prediction 253 304 - -
Bva14g01107 365 ProSiteProfiles Tify domain profile. 68 103 IPR010399 -
Bva14g01107 365 PANTHER GATA TRANSCRIPTION FACTOR 28 1 356 IPR045280 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01107 Bva-Chr14 5287355 5292399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01107 74 248 Tify Gene Family AT1G51600 56.522 1.08e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva14g01107 CCT 5.7e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01107 - - gmx:102669848 450.669