Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01096 ATGCTAAAATTCCATTGGTTGTCATCTTTCAAGTACCAAGAAAAAAATCCATCCTCGTCATCCACACTTAGCTATTGCTGTCAGTCTAAGCTACGCAACCGGAGAATGACGAGAAGAAAGATACAGATCAAGAAGATCGAAGACACTGCTTCAAGGCAGGTGACTTTCTCTAAGAGGAGGAGAGGGCTTTTCAAGAAGGCTCAGGAGCTGTCAACTCTTTGTGATGCTGAGATTGCTTTGATGGTCTTTTCTACTACTGATAGGCTCTTTCAGTTTTCCACTTCAAGTATGCAGGATCTAATTCAAAGGTATTGTCTGCAAACAGGAAACCTTGAGAAATTAGACCAGCCTTCTCTTGAGCAGCAGATTGAGGGTAGCAATTATACTATGTTGAGCAAGGAATTCGAAGAGAAAACCTTAGAAGTGAGAAGGTTGAACGGAGAAGAACTGCAAGGATTGAAATTTAAAGAGCTACAAAAGCTAGAAGATCTACTTGAGTCACGCTTGAATCGTGTCTCAAGAGTAaagAATGAAAGAATTCACAAAGAGATCAGTGCTCTTAAGAAACAGGGAGCTCAACTATTGCAAGAAAACAAGCAGTTAAAACAGCTTCAGAGGCATAGACATAAACAAGGCCAGCCATTTGACACCACTCTCAAGCTGGGGCTACTCGTCCCTGAACAAAATCAAAGCTTTTCAATGACGAGAGGCAGCACAAGCTA 722 0.4141 MLKFHWLSSFKYQEKNPSSSSTLSYCCQSKLRNRRMTRRKIQIKKIEDTASRQVTFSKRRRGLFKKAQELSTLCDAEIALMVFSTTDRLFQFSTSSMQDLIQRYCLQTGNLEKLDQPSLEQQIEGSNYTMLSKEFEEKTLEVRRLNGEELQGLKFKELQKLEDLLESRLNRVSRVKNERIHKEISALKKQGAQLLQENKQLKQLQRHRHKQGQPFDTTLKLGLLVPEQNQSFSMTRGSTS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01096 240 PANTHER - 35 211 - -
Bva14g01096 240 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 45 92 IPR002100 GO:0003677|GO:0046983
Bva14g01096 240 Gene3D - 48 130 IPR036879 GO:0003677|GO:0046983
Bva14g01096 240 PRINTS MADS domain signature 73 94 IPR002100 GO:0003677|GO:0046983
Bva14g01096 240 PRINTS MADS domain signature 38 58 IPR002100 GO:0003677|GO:0046983
Bva14g01096 240 PRINTS MADS domain signature 58 73 IPR002100 GO:0003677|GO:0046983
Bva14g01096 240 Coils Coil 158 207 - -
Bva14g01096 240 Pfam K-box region 122 203 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva14g01096 240 PANTHER SERUM RESPONSE FACTOR HOMOLOG 35 211 - -
Bva14g01096 240 CDD MADS_MEF2_like 38 104 IPR033896 GO:0000977|GO:0045944
Bva14g01096 240 SUPERFAMILY SRF-like 36 106 IPR036879 GO:0003677|GO:0046983
Bva14g01096 240 ProSiteProfiles MADS-box domain profile. 36 96 IPR002100 GO:0003677|GO:0046983
Bva14g01096 240 ProSitePatterns MADS-box domain signature. 38 92 IPR002100 GO:0003677|GO:0046983
Bva14g01096 240 SMART madsneu2 36 95 IPR002100 GO:0003677|GO:0046983
Bva14g01096 240 ProSiteProfiles K-box domain profile. 121 211 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01096 Bva-Chr14 5233672 5240624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01096 36 203 MADS-box Gene Family AT2G22540 56.805 1.59e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bva14g01096 K-box 2.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01096 - - dzi:111298666 212.231