Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01095 ATGACTAGGAGGAAAATTCAGATAAAGAGGATAGAGAATTTAACAACAAGGCAGGTGACTTTCTCTAAGAGGAGGAGAGGCCTTTTCAAGAAGGCACATGAGCTTTCCACTCTTTGTGATGCTGAGATAGCTCTCATTGTCTTTTCTAACACTGGCAAGCTGTATGAGTATGCTAGTTCAAGTATGATGCAGGTGATTGAAAGGCATTATAAGCATTCAGGCATTAACAAATCGGATCATTCCCAGGATATGCAGCTTGATGGTGAAATGTACAACAATCTCCGCGAGGAGGTATCTGAGAAGACTCGTGAACTGAGTCACCTGGGGGGTGGAAATCTGCAAGGATTAACTATGCAAGAATTACAGAAACTAGAGGAACTACTCAAAACAAGTTTGACCAGAGTTTCAAAAGCAAAGGATGCAAGATTTACGAGAGAGATTAGCATGCATAAGACAAAGAGAATCCAACTTATGGAAGAGAACCAGCGATTAAGAGAGGCACAGAGACTTGCAAATGAACAAGGACAGCCACCTGCTATATCGTTCCCTATTTGCAGTTCATCTGTTCCTCCTCTAAGCCACAACACTTCTGACAACTCTCTCAACTTGGGATTGCGATTGTTCAAATG 629 0.4197 MTRRKIQIKRIENLTTRQVTFSKRRRGLFKKAHELSTLCDAEIALIVFSNTGKLYEYASSSMMQVIERHYKHSGINKSDHSQDMQLDGEMYNNLREEVSEKTRELSHLGGGNLQGLTMQELQKLEELLKTSLTRVSKAKDARFTREISMHKTKRIQLMEENQRLREAQRLANEQGQPPAISFPICSSSVPPLSHNTSDNSLNLGLRLFK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01095 209 Coils Coil 154 174 - -
Bva14g01095 209 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bva14g01095 209 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bva14g01095 209 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bva14g01095 209 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bva14g01095 209 ProSiteProfiles K-box domain profile. 84 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva14g01095 209 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 178 - -
Bva14g01095 209 Gene3D - 14 93 IPR036879 GO:0003677|GO:0046983
Bva14g01095 209 PANTHER - 1 178 - -
Bva14g01095 209 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bva14g01095 209 Pfam K-box region 89 166 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva14g01095 209 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bva14g01095 209 SUPERFAMILY SRF-like 2 83 IPR036879 GO:0003677|GO:0046983
Bva14g01095 209 CDD MADS_MEF2_like 3 74 IPR033896 GO:0000977|GO:0045944
Bva14g01095 209 Coils Coil 121 141 - -
Bva14g01095 209 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01095 Bva-Chr14 5225850 5231225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01095 1 205 MADS-box Gene Family AT2G22540 43.644 1.35e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bva14g01095 K-box 2.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01095 - - jre:108995741 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g00921 13 4270101 4277789 Bva14g01095 14 5225850 5231225 BWGD