Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01039 ATGAGCGTAGCCACCAATCCACCACCGTCAACGCCCCCGCAAGCTCTAAAATTGGAGTCTATAGCTTGCATAGACACCGCTACGCTTTCCCAGTCTGAGCTCCATGCGCTCTCTCTCTGCTCACTCTCTGCCTTCGACCTTCGCTCCACCCATGACCTTGTCACCCCAAAAATCGAACGTGCTCTCTTCAACGAAAGCGCTGGCTCCCGTCGCCAGACCTATTCTAGACCCCGTAGGCAGCAATTCGCCACCGGTTCTCCCACCGGCCACCGCCGTCGCGTCGCCGGGCTTCTTCCCACTCCGAAGCTCCCACCAGTCCTTGCTGATGACCCGGAAAACGTAGAGAATCGGATGATCATCGATTATCTGAAGCAACTGATCAGGGAAGACCCAAATTTTGATCAAGTTGAGCTGGCCCCGCCTTCTGTTTCCTCTGTAAATGGAACAGCTTTGGAGTCTAGGGGTGAAATAGTGGCCAGACCAGAAATGAGTATGGTGAATTTTGGCGGggaaaggaagaggaagaggggAAGGAAGCCAAAAGTGAAGGTGTATTTGGAGGAGTGTTATAGGGAAAAAGAGGTTGTGAATAAGAATGGCGTTGCCATTGATCTTTCAGCTCTGGCTAATGCGGAGGATCCCTTTGCTGAGGAGTTGAGGAGAAGGACTGTGGGCTTGCAGAGTGAAGAAGAGTTATTGGGCTTTTTGAGGGACTTGGGTGGACAATGGGGTAGtaggaggaagaagaggaagattgTGGATGCAGGAGATTTCGGGGACGTGTTGCCGGTTGGTTGGAAGCTTTTGCTTGGTTTGAAGAGGAAAGATGGCCGTGCATGGATTTATTGCCGCAGATATATAAGCCCTAGTGGACATCAATTTGTTACTTGCAGAGAAGTTTCTTCATATCTGCAATCTATTTTTGGTTATAATGATGCACAATTGGCAATCAATCGTAGGGGTGAAAATATGCTGCAGGACAACAGGGTGACCATTGAAAGCTCTGCAGGTGTTACCCACGAGAATCAAGAACAAAGGAAGATTGTTACATCCAACCCAACTCTACCCAGTTCTTCTATATCTAATGAACGGGTGAAGGAAGTGGCATTGTTGGGGATTGATAACCTTGCAGATGTTCAAATACATGACCTATTTGAATGTCACAAATGCAGCATGACCTTTGATGAGAAGGATTCATACTTGCAGCACGTGCTGTCTTTTCACCAGAGGACAACAAGGCGGTATCGACTTGGTTCTTCTGTTGGAGATGGGGttataattaaagatggaAAGTTTGAATGCCAGTTCTGCCATAAGGTTTTTCTAGAAAGGCGTCGCTATAATGGTCATGTTGGGATACATGTTAGGAATTATGTGAGAGGAGTTGAAGAATCACCAGCACAGACAAATGTCCAACGGAGAGATAAGTCTCCAGTCAGGGAGGATATGCCTTTGAGGATCTCTAAGATGGATGCTCTAATTGAAATTGCGCAGAACTCTATCATGGAGAACTCTGACTTGGATCCTCATAGTAAAACCAACCATGGATCATCACCAGATAAATTGAACGTGATTCTTGCCTCAGAACCAGCTGTTGGCAACTTTGATCATGACATGAACTTTGAGTCTCCTCTCAGGGAACGGCAAATAGAATATAGCATTACTGACAAAATTATGGGTCAGGATTTGAATCAACAAGATGGTCAACATGTAAACATAGATGgaaaattacagaaaattgatgataataaGAAAGTTCTAGACGTAAAAATGGATACTTGTCTTGATTACATGGATCTGTTATCTGTAAACAAGCAAAATGTTAATGCATCTGGATCtttaaatggaaaagaaaatatgggaatgattgttgataattttgatCAGTCTGGGGTTGATCTGGAAGGAGTTTCTCACAGTCCTTTGCTTCCTTTATCTGGAAAGTATCCCACACCTGAAGCTGGgagtataaaaaattctggTTCCTTTACTGATGAGGGGCATTCTGTGCCCAATGAAGATGACAGTAGCAAGACTGAGCTGAGAATTGCTTTAGGTGGCAACATCGATGCATCTCTGAGCAATAATGTCCAAGAGAGAGTAATGTCAATTTCTGAAGATAATGTAATCCAGTCTGGGATTTCTAACCCCTCTATGAGCATGTCGCAATCAAGGGATGTTTTCCCCCATTCAAATGATCTCTCAGACAAGGGATA 2216 0.4255 MSVATNPPPSTPPQALKLESIACIDTATLSQSELHALSLCSLSAFDLRSTHDLVTPKIERALFNESAGSRRQTYSRPRRQQFATGSPTGHRRRVAGLLPTPKLPPVLADDPENVENRMIIDYLKQLIREDPNFDQVELAPPSVSSVNGTALESRGEIVARPEMSMVNFGGERKRKRGRKPKVKVYLEECYREKEVVNKNGVAIDLSALANAEDPFAEELRRRTVGLQSEEELLGFLRDLGGQWGSRRKKRKIVDAGDFGDVLPVGWKLLLGLKRKDGRAWIYCRRYISPSGHQFVTCREVSSYLQSIFGYNDAQLAINRRGENMLQDNRVTIESSAGVTHENQEQRKIVTSNPTLPSSSISNERVKEVALLGIDNLADVQIHDLFECHKCSMTFDEKDSYLQHVLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRGVEESPAQTNVQRRDKSPVREDMPLRISKMDALIEIAQNSIMENSDLDPHSKTNHGSSPDKLNVILASEPAVGNFDHDMNFESPLRERQIEYSITDKIMGQDLNQQDGQHVNIDGKLQKIDDNKKVLDVKMDTCLDYMDLLSVNKQNVNASGSLNGKENMGMIVDNFDQSGVDLEGVSHSPLLPLSGKYPTPEAGSIKNSGSFTDEGHSVPNEDDSSKTELRIALGGNIDASLSNNVQERVMSISEDNVIQSGISNPSMSMSQSRDVFPHSNDLSDKG 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01039 738 ProSiteProfiles Zinc finger C2H2 type domain profile. 385 413 IPR013087 -
Bva14g01039 738 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 15 737 - -
Bva14g01039 738 ProSiteProfiles Zinc finger C2H2 type domain profile. 432 459 IPR013087 -
Bva14g01039 738 MobiDBLite consensus disorder prediction 653 667 - -
Bva14g01039 738 ProSitePatterns Zinc finger C2H2 type domain signature. 387 408 IPR013087 -
Bva14g01039 738 ProSitePatterns Zinc finger C2H2 type domain signature. 434 454 IPR013087 -
Bva14g01039 738 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 15 737 IPR037472 -
Bva14g01039 738 MobiDBLite consensus disorder prediction 65 109 - -
Bva14g01039 738 MobiDBLite consensus disorder prediction 712 738 - -
Bva14g01039 738 MobiDBLite consensus disorder prediction 649 678 - -
Bva14g01039 738 MobiDBLite consensus disorder prediction 66 87 - -
Bva14g01039 738 SMART c2h2final6 432 454 IPR013087 -
Bva14g01039 738 SMART c2h2final6 385 408 IPR013087 -
Bva14g01039 738 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 252 324 IPR001739 GO:0003677
Bva14g01039 738 MobiDBLite consensus disorder prediction 712 729 - -
Bva14g01039 738 SUPERFAMILY DNA-binding domain 260 307 IPR016177 GO:0003677
Bva14g01039 738 Gene3D Classic Zinc Finger 373 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01039 Bva-Chr14 4993203 4996373 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva14g01039 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01039 - - adu:107468625 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g01039 14 4993203 4996373 Bva14g01039 14 4993203 4996373 ECH