Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g01025 ATGTCTCACTTTGGAAGGTCTGGTCCCCCAGATATCACAGACACATACTCTCTTCTCATACTCAACATCGCATTTCGCACCACCGCTGATGACCTATTTCCGCTGTTCGATAAGTATGGCAAGGTCGTCGACATCTTCATCCCCAAGGATCGAAGGACTGGTGAGTCACGGGGTTTTGCATTTGTGCGGTACAAGTATGCAGACGAGGCTTCAAAGGCCGTGGAAAAGCTTGATGGAAGAGTTGTTGATGGTCGAGAAATAACTGTCCAGTTTGCGAAGTATGGGCCAAATGCTGAGAAGATTCAGAAGGGAAGGGTCATTGAGCCAGTCCCAAGATCCAGGCACAGGTCAAGGAGCCAAAGTCCTAGGCGAAGGTATCGGGATGATTACAGGTACAGGGACCACAGGAGAAGTGGCAGCAGAAGTTATGATAAGTATGAACGAGACCGGTACCACGGGAGAGACAGAGGTTCTCGTCGGCGAAGCAGAAGCCGTAGTGCCAGTCCTGATTACGACAGGAGCCATGGAAAGGGCCgttatgatgatgatgagatACGCAGTCGAAGCAGAAGTCGATCAGTGGATAGCCGCACTCCTACGCGTCATAGACCTAGCCCTCGAAGGAGCCCTTCACCACGTAGGAGCCCTTCCCCTCAGAGAAGTGTTTCCCCCCGAAGGAAACCTAGCGGCGAAAGCCCTGAGAGTTGGAGCCGTGATGGACGATCACCTACACCCCGTAGTGTGTCACCCCGCAGGCAACCTCTTGATTCAAGAAGCCCATCCCCTCAAAATCCAGATGGTGATgaatA 809 0.5117 MSHFGRSGPPDITDTYSLLILNIAFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVEKLDGRVVDGREITVQFAKYGPNAEKIQKGRVIEPVPRSRHRSRSQSPRRRYRDDYRYRDHRRSGSRSYDKYERDRYHGRDRGSRRRSRSRSASPDYDRSHGKGRYDDDEIRSRSRSRSVDSRTPTRHRPSPRRSPSPRRSPSPQRSVSPRRKPSGESPESWSRDGRSPTPRSVSPRRQPLDSRSPSPQNPDGDE 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g01025 269 MobiDBLite consensus disorder prediction 214 269 - -
Bva14g01025 269 Gene3D - 4 105 IPR012677 -
Bva14g01025 269 MobiDBLite consensus disorder prediction 122 154 - -
Bva14g01025 269 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Bva14g01025 269 MobiDBLite consensus disorder prediction 100 269 - -
Bva14g01025 269 MobiDBLite consensus disorder prediction 162 202 - -
Bva14g01025 269 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 19 88 IPR000504 GO:0003723
Bva14g01025 269 SMART rrm2_1 17 90 IPR003954 GO:0003676
Bva14g01025 269 SUPERFAMILY RNA-binding domain, RBD 9 102 IPR035979 GO:0003676
Bva14g01025 269 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 269 - -
Bva14g01025 269 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SC35 1 269 - -
Bva14g01025 269 SMART rrm1_1 17 90 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g01025 Bva-Chr14 4907019 4910990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g01025 12 89 Eukaryotic Initiation Factors Gene Family AT4G34110 41.026 5.70e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g01025 K12891 - gmx:100778928 293.893