Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00973 ATGCCCAGAATAGCAATTCCCAACTCCTCCACCGAACTGCTTCCAGTCCTTCGATTCGTCCTCTCCACCTGCAATTACTTGCGGTTCGGCTCGTTTCACAAGAGgttacagaaaatggcagaTGCTGAGGACATTCAACCCCTCGTTGTTGACAATGGAACTGGAATGGTCAAGGCTGGTTTTGCTGGTGACGATGCCCCTAGGGCTGTGTTCCCCAGTATTGTTGGACGACCTCGTCACACTGGTGTTATGGTCGGGATGGGTCAGAAGGATGCCTATGTGGGTGATGAAGCCCAGTCAAAAAGAGGTATTCTCAGCTTGAAGTACCCTATAGAGCATGGTATAGTCAGTAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTTGCTCCTGAAGAACATCCAGTGCTTCTTACTGAGGCACCGCTCAACCCTAAAGCCAACAGAGAGAAGATGACACAGATTATGTTCGAGACTTTCAATGTGCCTGCTATGTATGTTGCCATTCAGGCTGTTTTGTCTCTGTATGCCAGTGGTCGTACAACAGgTATTGTGCTCGATTCCGGTGACGGTGTGAGTCACACAGTGCCAATTTATGAAGGGTATGCTCTCCCCCATGCTATCCTCCGGTTGGACCTTGCTGGTCGTGATTTGACAGAGTACTTGATGAAAATTCTTACCGAGAGAGGATACTCTTTCACCACCACTGCTGAACGGGAAATTGTCCGTGATGTGAAGGAAAAGCTAGCGTATGTTGCCCTAGATTTTGAACAGGAATTGGAGACTGCTAAGAGCAGTTCTGCAGTGGAGAAGAGCTATGAGTTGCCTGATGGGCAGGTCATCACAATTGGGGCTGAGAGATTCCGTTGCCCAGAAGTACTTTTCCAGCCAGCTCTCATTGGTATGGAAGCTGCTGGTATCCATGAAACTACATACAACTCGATCATGAAATGTGACGTGGATATTAGGAAGGATCTGTACGGAAACATTGTGCTCAGTGGTGGGTCAACTATGTTCCCTGGAATTGCTGACCGTATGAGCAAAGAAATTACCGCTCTTGCGCCAAGCAGCATGAAGATCAAGGTGGTTGCACCTCCAGAGAGAAAATACAGTGTCTGGATTGGTGGGTCAATCTTGGCTTCCCTCAGCACCTTCCAACAGATGTGGATTTCCAAGGGTGAATACGATGAATCTGGTCCAGCCATTGTTCACAGAAAGTGCTTCTG 1247 0.4723 MPRIAIPNSSTELLPVLRFVLSTCNYLRFGSFHKRLQKMADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILSLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLMKILTERGYSFTTTAEREIVRDVKEKLAYVALDFEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPALIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPAIVHRKCF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00973 415 PANTHER ACTIN-2-LIKE 39 414 - -
Bva14g00973 415 ProSitePatterns Actins and actin-related proteins signature. 144 156 IPR020902 -
Bva14g00973 415 PRINTS Actin signature 155 168 IPR004000 -
Bva14g00973 415 PRINTS Actin signature 101 123 IPR004000 -
Bva14g00973 415 PRINTS Actin signature 276 292 IPR004000 -
Bva14g00973 415 PRINTS Actin signature 89 100 IPR004000 -
Bva14g00973 415 PRINTS Actin signature 66 75 IPR004000 -
Bva14g00973 415 PRINTS Actin signature 180 199 IPR004000 -
Bva14g00973 415 ProSitePatterns Actins signature 1. 93 103 IPR004001 -
Bva14g00973 415 SUPERFAMILY Actin-like ATPase domain 44 193 IPR043129 -
Bva14g00973 415 PANTHER ACTIN 39 414 IPR004000 -
Bva14g00973 415 ProSitePatterns Actins signature 2. 396 404 IPR004001 -
Bva14g00973 415 Gene3D Actin; Chain A, domain 4 220 311 - -
Bva14g00973 415 CDD NBD_sugar-kinase_HSP70_actin 48 221 - -
Bva14g00973 415 Gene3D - 178 378 - -
Bva14g00973 415 Pfam Actin 43 415 IPR004000 -
Bva14g00973 415 SUPERFAMILY Actin-like ATPase domain 187 415 IPR043129 -
Bva14g00973 415 SMART actin_3 45 415 IPR004000 -
Bva14g00973 415 Gene3D - 48 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00973 Bva-Chr14 4642752 4645694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00973 39 415 Cytoskeleton Gene Families AT5G09810 96.286 0.0 758