Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00955 ATGTCTCATAGAAAGTTTGAGCACCCCAGACATGGCTCCCTTGGTTTTCTCCCTAGAAAACGTGCTTCTCGTCATCGTGGGAAAGTGAAGGCTTTCCCTAAAGATGATCCCAGCAAGCCATGCAGGTTGACTGCCTTTTTGGGTTACAAGGCTGGGATGACCCATATTGTCAGAGAAGTCGAGAAACCTGGATCAAAGCtccacaaaaaagaaacatgtgAGGCTGTTACTATCATTGAAACTCCACCAATTGTTATTGTTGGAGTGGTGGGATATGTGAAGACACCCCGTGGCCTTCGCACACTGAATACAGTTTGGGCCCAGCATCTAAGTGAGGAAGTTAAGAGGCGATTCTACAAGAACTGGTGCAAGTCTAAGAAGAAGGCATTTACCAAATACTCAAAAAGATATGAAActgaagaaggaaagaaagatattacagcacaaattgagaaaatgaaaaaatatgcGTCTGTCATCCGTGTTCTGGCTCATACTCAGATAAGAAAGATGAAGGGtttgaaacagaaaaaggCACATCTAATGGAAATCCAAGTCAATGGTGGGACTGTAGCACAAAAGGTGGACTATGCTCTTGGGTTCTTTGAGAAGCAAGTCCCAGTTGATGCTATTTTCCAGAAAGATGAGATGATAGACATAATTGGCGTGACCAAGGGTAAAGGTTATGAAGGTGTGGTAACTCGTTGGGGTGTTACTCGCCTTCCACGCAAGACTCATAGAGGTCTGAGGAAGGTTGCTTGTATCGGTGCTTGGCACCCTGCCAGGGTTTCCTTCACCGTTGCCAGAGCTGGTCAGAATGGATATCATCACCGCACAGAGCTGAATAAGAAGGTCTACAAGGTTGGCAAGGCAGGCCAAGAGTCACACACTGCCATCACTGAATTCGACAGAACTGAGAAGGATATTACTCCCATTGGTGGTTTCCCTCACTATGGCTTGGTGAAGGAAGATTATATTATGGTGAAGGGAGGCATTGTTGGAACCAAAAAGCGGGTTGTGACTCTCCGTCAGTCACTACTGAAGCAGACATCTCGTGTGGCCCTTGAAGAGATCAAACTCAAGTTCATTGATACCTCTTCTAAGTTTGGACACGGTCGCTTCCAGACCACACAGGAGAAGCAAAAGTTCTACGGTCGATTGAAGGCATA 1169 0.4286 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYKNWCKSKKKAFTKYSKRYETEEGKKDITAQIEKMKKYASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTVAQKVDYALGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKVGKAGQESHTAITEFDRTEKDITPIGGFPHYGLVKEDYIMVKGGIVGTKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00955 389 Gene3D - 83 207 - -
Bva14g00955 389 MobiDBLite consensus disorder prediction 1 36 - -
Bva14g00955 389 PANTHER 60S RIBOSOMAL PROTEIN L3-LIKE 1 389 - -
Bva14g00955 389 Gene3D Ribosomal protein L3, domain 3 1 274 IPR044892 -
Bva14g00955 389 SUPERFAMILY Translation proteins 4 370 IPR009000 -
Bva14g00955 389 Pfam Ribosomal protein L3 1 370 IPR000597 GO:0003735|GO:0005840|GO:0006412
Bva14g00955 389 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 389 IPR045077 GO:0003735|GO:0005840|GO:0006412
Bva14g00955 389 ProSitePatterns Ribosomal protein L3 signature. 212 235 IPR019926 -
Bva14g00955 389 Gene3D Translation factors 44 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00955 Bva-Chr14 4555826 4560076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00955 1 386 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 87.306 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00955 K02925 - mnt:21387973 726.857