Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00932 ATGTCTTTGATGAATCGTCCTCGTGTTGTGGTCAATGGGGTTCGAAGAATGAGAACCTTCCATTACTTCTGGTGCCAAGCTTGCCAACGCACTGTGAGAATCGCTTCTGCAAACCCAAATGCCCATACATGCCCTTTTTGCTTCAATCGCTTGCGTTTTGAGCTTGATATCTCAAGGTCAAGGCTTATCATGGATCTCCCTAATAACTTGGAGCCTTCCTCTGCAGCTCAGTTGATGAACAGCTTGGCTCTCATTCTTGACCCTTCTATGAGGAGGCGGAACACTCATTTCAACAGAACATTCCAATGGGAAACAGAAGACGAAGATGGCCCAGGTTCAGGGTCTTGGATTACTCTTAGATTTGTTAGGCCAAATCGTCCACCTGGAGCCATTGCCCAACCAGAGAATGTGGCTCCCCAAGCCAACGACACTCGCGTAGCCACCCCTTTTGAGGATGCATCTGATGATTTTGTTGAAGGGTTGGTGCAGAACAACCGGCAGGGGCCGCCTCCGGAGGCGGTTTCAGCCATTGAGGCGTTGCCACTAGTGAAAGTGACACAAACCCATTTGGCAAGTGATCCCAATTGTCCAATCTGCAAAGATGAATTTCAACTTGATATGGAAGTGAGGGAGTTGCCCTGCAAGCACTTTTACCATTCTGACTGCATTGTGCCTTGGCTGAGAATCCAAAATACTTGTCCTATCTGCCGCCATCAGCTACAACCCACTTCTAATTACCATTTCCAGAATCAAATTGAAGAGAATTAtgttcctcttcctcttcccttTGGGGAAGTCACAAATAGTCTCAATTGGTTTTGGAGCCAGTTGGTTTCTCTCAGACCTCTTCGTGCAGTTTTGGATTGGACTCAGAGACAGTACCATGACTTCCAAGAAAATCAAACTCCTAGAGATGGTGCTTGGTGGCGCTCATGGCTCGTCTTATA 947 0.4615 MSLMNRPRVVVNGVRRMRTFHYFWCQACQRTVRIASANPNAHTCPFCFNRLRFELDISRSRLIMDLPNNLEPSSAAQLMNSLALILDPSMRRRNTHFNRTFQWETEDEDGPGSGSWITLRFVRPNRPPGAIAQPENVAPQANDTRVATPFEDASDDFVEGLVQNNRQGPPPEAVSAIEALPLVKVTQTHLASDPNCPICKDEFQLDMEVRELPCKHFYHSDCIVPWLRIQNTCPICRHQLQPTSNYHFQNQIEENYVPLPLPFGEVTNSLNWFWSQLVSLRPLRAVLDWTQRQYHDFQENQTPRDGAWWRSWLVL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00932 315 Pfam Ring finger domain 195 237 IPR001841 -
Bva14g00932 315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 243 IPR013083 -
Bva14g00932 315 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 21 310 - -
Bva14g00932 315 SUPERFAMILY RING/U-box 176 244 - -
Bva14g00932 315 ProSiteProfiles Zinc finger RING-type profile. 196 237 IPR001841 -
Bva14g00932 315 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 21 310 - -
Bva14g00932 315 SMART ring_2 196 236 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00932 Bva-Chr14 4446771 4448244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00932 1 291 C3H Transcription Factor Family AT1G68180 31.058 1.60e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00932 K11982 - gmx:100793656 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00932 14 4446771 4448244 Bva14g00932 14 4446771 4448244 ECH