Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00905 ATGGAGGCTCCTCCCGATGACGATTGCTGCCCTGTCTGCCGTGGCCAATTCAAACTTCCATGCCGTACCTCCTGCTCCCACTGGTATTGCgGAGAGTGTATATTGAGCGTGTGGCTCCACAGAGATGCAATGAAGCGCTGCAGATGCCCAATTTGCTGCTGCCAATTTTCCAGCCTGGCACCCTTCCAAGCTGCATTTGACTATAACTACGAACCTGAAGCTCAGAAAATTATGGAAAATGTGAGAAGGTACAATAGGTTGCACATGGGAGGGGTGCAAGGACTCATTCAGAAGCTGTACTATCTCCCATTTCTTGTTCGAATGGCTCTACAAGATATGATGGACCCTGATAAAACAAGCACCTACTTGTGTAAAGTGCGCATTTTTGCAATGATACTTGGCTTGATTTACATGCTGATCCCATTGGATATCATCCCATATGATAAACGACATATATTAAGTTTGTTTGACCACTCTGCGGTTGCGTTTGTAACTATCATGCATATCATTGGACTCTTACGTTCAAGACGTTTTAGGGGATA 542 0.4502 MEAPPDDDCCPVCRGQFKLPCRTSCSHWYCGECILSVWLHRDAMKRCRCPICCCQFSSLAPFQAAFDYNYEPEAQKIMENVRRYNRLHMGGVQGLIQKLYYLPFLVRMALQDMMDPDKTSTYLCKVRIFAMILGLIYMLIPLDIIPYDKRHILSLFDHSAVAFVTIMHIIGLLRSRRFRG 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00905 180 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Bva14g00905 180 Pfam RING-type zinc-finger 10 50 IPR027370 -
Bva14g00905 180 SUPERFAMILY RING/U-box 2 57 - -
Bva14g00905 180 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF170-LIKE ISOFORM X1 3 177 - -
Bva14g00905 180 PANTHER UNCHARACTERIZED 3 177 IPR038896 GO:0061630
Bva14g00905 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 89 IPR013083 -
Bva14g00905 180 ProSiteProfiles Zinc finger RING-type profile. 10 52 IPR001841 -
Bva14g00905 180 SMART ring_2 10 52 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00905 Bva-Chr14 4280470 4283529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00905 2 131 C3H Transcription Factor Family AT4G33940 44.615 2.17e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00905 K15707 K24166 cpap:110813691 188.348