Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00904 atgaGGCAATCTGAATCTTCCAAGGGTGTTACAGGTGATGATAAGTTTCCTAAAGTTAATTGGTTGCAACACGCCTCTGCACATGATAACTTCTCATGCCAAAACAAGTTCTTGAGTTCAAATTTTCTGTTCGCCTTGCCAACACAAAAACCTTGTTCCAAGGAAGCAACGGATGGGGGGTTCGTGGCTGGTCAAAGTCAAAATGTTCAGAGGTTGCACAGAGCTCAAGTTGAAAAGGCCTGGCATGCTCTCTCGAGTGTACAGATTTCTTGCGGGAGTTATACTAAACCTGGAAAAACTGTACAAATTACTCCTCCTGTTGATGAAGGCAGGAAAACAAATTCCTTCCAAATAGCTTCTGAGAATGACAGATCTTCTCTAAATTTGCAAAATCGTAGACTTGAGAGTGAAAACAAAGCCAAGTCTAATCAATATTTTGCATCAAGTAATGCTATAGCTGAAGATGAAGGACATAGTCTGAGGTATTCTGATGACACGAGAACTCCAACGGTAAATAATCATTGTTCGGATGGTTCAGTGAACTTACATACTAAGTATACTGGTCAAATCAAAGATTCTAGAAAATGTATGGCTGGTGACATTGATGACGACAACGACGACGATTTACTTGAGAACATTGACGTTGATCAAATAGTGGACAACTACCAGTCAAGTTGTACTCCTCAACCAACAGTGTCGAAACTTCCTCCTATTACTCCAACTTCagataaagataattattctGGGCAAAGGGAGTATTGTTTGCCACCGGAATTGTGCTCGGATTGCGTCCATGGTTATAAGATAGGGCTTTGCCCTGAAGCAGCAAATCATTTGCAGGAATTTAAGGACAATCTAATTGCCATTTCCAACGAACTTCTTGACAATGTTGACAATCTCAGTCTAACAGAGATTGCAAGGCTTCGCCAAGACAGGTCACAGCTCAATAAGCAAATTCAGCAGCTTGAAAGATATCTTCATTCTAGTAATCTTGATGAGGAAAGGCAAAAGTCACATTTTTCTGCATCAACAGCACCTCCTTCATCTTTCCTGTTCGAAACACCGAACCAAAGTGTCCCCAGGAGTGGACTAGTGAGTTGTGCCCAGGTTTATATGGATAATGAACCATATGGGTCGTCTTTTCAGTCGTATTCATTCTCTTCAGTGGATAAGTATGGGATGTCATCAGGTCTGGTGGAGAGGGAAGCATACATCCCAAAGATTATTAACGTTAATTATATTGAAGGTTCTGGAGATGAGCGCTGGAGAAGCCGGAATTTCCCTTGGACAAAAAAGTCAGAGGCCAATAATAAGAAAGTTTTTGGAAATCACTCATTCCGCCCCAATCAAAGAGAGGTTATCAATGCAACCATGAGTGGCTATGATGTTTTCGTTTTAATGCCAACTGGTGGAGGAAAGAGTCTTACCTATCAGCTCCCTGCTCTTATTTGTCCAGGTATAACGCTGGTAATTTCTCCCCTTGTGTCCCTTATACAAGATCAAATAATGCATTTACTGCAGGCAAATATACCTGCTGCTTACTTAAGTGCCAATATGGAATGGACTGAACAGCAGGAGATCCTTAGAGAACTGAGTTCTGATTATTGTAAATACAAACTGTTATATGTGACACCGGAAAAGGTTGCTAAAAGTGAGGCTCTTCTACGGCAATTGGAGGGTTTATATGTTCGTGAGTTGCTTGCAAGGATTGTAATTGATGAGGCTCACTGTGTGAGCCAATGGGGGCATGATTTCAGACCAGATTATCAGAGCCTTGGGATATTGAAACAGAAATTTCCAAACACCCCAGTTTTAGCTTTGACAGCTACAGCAACAACCAGTGTAAAAGAAGATGTTGTGCAAGCTCTTGGTCTTGTCAACTGTATTATTTTTCGGCAAAGTTTTAATCGCCCAAATTTGTGGTATTCTGTTATTcccaagacaaaaaaatgcTTGGAGGatattgacaaattcatcAGGGAAAATCATTTTGATGAATGTGGAATTATCTATTGTCTTTCACGGAAGGACTGTGAAAAAGTTGCTGAAAAGTTGCAGGAATGTGGACATAAAGTTGCATTTTATCATGGTAGCATGGATCCTGCTCAACGTGCATTTGTTCAAAAGCAGTGGAGCAAAGATGAAATCAATATAATCTGTGCTACTGTGGCATTTGGAATGGGTATTAACAAACCTGATGTCCGTTTTGTAATCCATCATTCTCTCCCAAAATCAATTGAAGGCTACCACCAGGAGTGTGGACGAGCTGGTAGAGATGGTCAACGTTCATCCTGCGTATTATATTATAGCTATAGTGACTATATACGAGTTAAGCATATGATAAGTCAAGGAGCAATAGAGCAAAGTCCCTTTACAGGTTACGGTCGtgcaaatatgataaattctGGGAGGATACTGGAAACTAACACTGAAAATCTTTTGCGGATGGTCAGTTATTGTGAAAATGATGTTGATTGTAGGCGCCTTCTGCAGCTTGCACATTTTGGTGAGAAGTTTGATTCTGCAACCTGTAAGAAAACATGTGATAATTGCTTGaagattaaaagttttattgagAAGGATGTTACAGAAACGGCAAAGCAATTGGTTGAACTAGTTAAGCTAACGGGGCAGCAGTTCTCATCATCTCACATATTAGAAGTGTATCGTGGTTCCTTAAACCAGTTTgTCAAGAAACACCGACATGAGACCGTGAGACTTCATGGTGCTGGAAAGCATTTAACTAAGGGTGAGGCTTCCCGTGTATTGCATCATCTTGTTGTTGAGGATTTTCTCGTGGAGGATGTTAAGAAAAGTGATATTTATGGATCAGTCTCATCAATATTGAAGGTTAATGAGGCCAAGGTCCGTAATCTGTTTGGTGGGCAGAGAATCATATTAAGATTTCCTTCCGCTCTAAAAGTGTCCAAGCAGGGGAATCTTGAAGTAACTCCGGCTAAAGGATCTTTGACTTCTGGGAAGCTGAATCTTCCAAAAATTGATACTCCTGCTCAAcctcaaaatgaaaaggacTTGGATCTTTCAGCTAAATTATACACTGCTCTGCGGATGCTTCGGACAGCTCTTGTTAGAGAAGCTGGGGAGGGTGTTATGGCTTACCACATATTTGGCAACGCTACACTGCAGCAGATAAGCAAGAGACTACCCAGAACAAAGGAAGAACTCCTTGATATCAATGGCATTGGCAAGGCTAAGATAAGCAAGTATGGAGATCGGGTACTGGAAACAATTGGAAAGACTATAAAGGTGTATAACAAGTTTGGCAGCAACAGCTGTGGCAGCAATGAGAGTACTGATTCTGCCAAAAGGAGACGAGAAGCATTAGGAGACCTAAATGCAAAGTTGGAGGATGATGACTTGACCAATAGTACTGATCGTTCAAAGAGAAGGACGACCAAGAAGCAGAATAGAAAAGCTGAGGCTCATGATTCTGCAGAGGAAGACTTGTACGTTGACTGTTTAGATGATGACCTAGATTTTGACAAGTTAGAAGATGATGCATTGGATAAAGTGACTCTTAAAAATGCTTTGGGAAGAGTATTGCCTCAATGGACAGCATCTTG 3584 0.399 MRQSESSKGVTGDDKFPKVNWLQHASAHDNFSCQNKFLSSNFLFALPTQKPCSKEATDGGFVAGQSQNVQRLHRAQVEKAWHALSSVQISCGSYTKPGKTVQITPPVDEGRKTNSFQIASENDRSSLNLQNRRLESENKAKSNQYFASSNAIAEDEGHSLRYSDDTRTPTVNNHCSDGSVNLHTKYTGQIKDSRKCMAGDIDDDNDDDLLENIDVDQIVDNYQSSCTPQPTVSKLPPITPTSDKDNYSGQREYCLPPELCSDCVHGYKIGLCPEAANHLQEFKDNLIAISNELLDNVDNLSLTEIARLRQDRSQLNKQIQQLERYLHSSNLDEERQKSHFSASTAPPSSFLFETPNQSVPRSGLVSCAQVYMDNEPYGSSFQSYSFSSVDKYGMSSGLVEREAYIPKIINVNYIEGSGDERWRSRNFPWTKKSEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQEILRELSSDYCKYKLLYVTPEKVAKSEALLRQLEGLYVRELLARIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTPVLALTATATTSVKEDVVQALGLVNCIIFRQSFNRPNLWYSVIPKTKKCLEDIDKFIRENHFDECGIIYCLSRKDCEKVAEKLQECGHKVAFYHGSMDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMISQGAIEQSPFTGYGRANMINSGRILETNTENLLRMVSYCENDVDCRRLLQLAHFGEKFDSATCKKTCDNCLKIKSFIEKDVTETAKQLVELVKLTGQQFSSSHILEVYRGSLNQFVKKHRHETVRLHGAGKHLTKGEASRVLHHLVVEDFLVEDVKKSDIYGSVSSILKVNEAKVRNLFGGQRIILRFPSALKVSKQGNLEVTPAKGSLTSGKLNLPKIDTPAQPQNEKDLDLSAKLYTALRMLRTALVREAGEGVMAYHIFGNATLQQISKRLPRTKEELLDINGIGKAKISKYGDRVLETIGKTIKVYNKFGSNSCGSNESTDSAKRRREALGDLNAKLEDDDLTNSTDRSKRRTTKKQNRKAEAHDSAEEDLYVDCLDDDLDFDKLEDDALDKVTLKNALGRVLPQWTAS 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00904 1194 ProSiteProfiles Rhodanese domain profile. 669 711 IPR001763 -
Bva14g00904 1194 SMART ultradead3 442 645 IPR014001 -
Bva14g00904 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 778 IPR027417 -
Bva14g00904 1194 Pfam DEAD/DEAH box helicase 448 616 IPR011545 GO:0003676|GO:0005524
Bva14g00904 1194 MobiDBLite consensus disorder prediction 1119 1136 - -
Bva14g00904 1194 Pfam HRDC domain 1016 1084 IPR002121 GO:0003676
Bva14g00904 1194 SMART RQC_2 861 971 IPR018982 GO:0006260|GO:0006281|GO:0043138
Bva14g00904 1194 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 438 912 IPR004589 GO:0004386|GO:0006310
Bva14g00904 1194 Gene3D - 637 854 IPR027417 -
Bva14g00904 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 902 IPR027417 -
Bva14g00904 1194 MobiDBLite consensus disorder prediction 226 246 - -
Bva14g00904 1194 Coils Coil 305 325 - -
Bva14g00904 1194 Coils Coil 124 144 - -
Bva14g00904 1194 Pfam Helicase conserved C-terminal domain 653 759 IPR001650 -
Bva14g00904 1194 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 454 629 IPR014001 -
Bva14g00904 1194 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 4A 133 1161 - -
Bva14g00904 1194 ProSiteProfiles HRDC domain profile. 1012 1094 IPR002121 GO:0003676
Bva14g00904 1194 CDD DEXHc_RecQ 434 636 - -
Bva14g00904 1194 Pfam RecQ zinc-binding 771 852 IPR032284 -
Bva14g00904 1194 Gene3D - 859 968 IPR036388 -
Bva14g00904 1194 PANTHER DNA HELICASE RECQ FAMILY MEMBER 133 1161 - -
Bva14g00904 1194 SMART helicmild6 679 760 IPR001650 -
Bva14g00904 1194 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 568 577 IPR002464 -
Bva14g00904 1194 Gene3D - 410 636 IPR027417 -
Bva14g00904 1194 MobiDBLite consensus disorder prediction 1119 1149 - -
Bva14g00904 1194 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 654 804 IPR001650 -
Bva14g00904 1194 Gene3D HRDC domain 1009 1094 IPR044876 -
Bva14g00904 1194 Pfam RQC domain 858 971 IPR018982 GO:0006260|GO:0006281|GO:0043138
Bva14g00904 1194 CDD SF2_C_RecQ 637 769 - -
Bva14g00904 1194 SMART hrdc7 1012 1094 IPR002121 GO:0003676
Bva14g00904 1194 SUPERFAMILY HRDC-like 1015 1087 IPR010997 GO:0000166|GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00904 Bva-Chr14 4271072 4279394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00904 668 783 Eukaryotic Initiation Factors Gene Family AT3G19760 25.862 3.61e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00904 K10901 - gmx:100800006 1642.48