Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00891 ATGGCTCTGTGGAGAGCTCGCGcagcttcgtcaactttgttCAGTATCACCAAGCTCAACATCCTTAAGCCCTCCTCCGTCTTCAACGATAACACCGCCAATGCTTGTCGCAAATTTTCCTCTGATGTTGCAAACGCATCTGGTAGTCCACGGGAGAGCCTTGCGAACCAAATGATGTTTCTTGACATAAACTCACGAATTGGGAGCAGCATGCCACTTTCTTCAATGCGAATTGGAACAATAATTCACAACATTGAGTTGAAGCCAGGGCAAGGTGGCAAGCTGGTCCGAGCAGCTGGTACAAGCGCGAAGATCTTGAAAGATCCCAAATCACAATACTGTTTAATTCAACTCCCTTCAGGTGTTAAAAAGATGATCGATTCTCGTTGCAGGGCCACAGTGGGCACAGTATCTAATCCAAGCCATAAAGACAAGAAGCTTAGGAAGGCTGGGCATAGCCGATGGCTTGGTATTAGACCAACAGTTCGAGGAGTGGCGATGAATCCTGTAGATCATCCTCATGGTGGAGGAGAAGGTAAGAGCAAGAGTAGTGGGAAATATGGGAGAGTGTCTGTTTCTCCTTGGGGTAAGCCAACAAAGGGTGGCTATAAAACTGGACCTCTGAAGCGCAGAAAGTA 638 0.4608 MALWRARAASSTLFSITKLNILKPSSVFNDNTANACRKFSSDVANASGSPRESLANQMMFLDINSRIGSSMPLSSMRIGTIIHNIELKPGQGGKLVRAAGTSAKILKDPKSQYCLIQLPSGVKKMIDSRCRATVGTVSNPSHKDKKLRKAGHSRWLGIRPTVRGVAMNPVDHPHGGGEGKSKSSGKYGRVSVSPWGKPTKGGYKTGPLKRRK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00891 212 TIGRFAM rplB_bact: ribosomal protein uL2 63 208 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Bva14g00891 212 Gene3D Ribosomal protein L2, domain 3 138 212 IPR014726 -
Bva14g00891 212 Gene3D - 62 137 IPR014722 -
Bva14g00891 212 PANTHER RIBOSOMAL PROTEIN L2 45 212 IPR002171 GO:0003735|GO:0005840|GO:0006412
Bva14g00891 212 SMART Ribosomal_L2_C_2 65 198 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bva14g00891 212 ProSitePatterns Ribosomal protein L2 signature. 160 171 IPR022671 GO:0003735|GO:0005840|GO:0006412
Bva14g00891 212 Pfam Ribosomal Proteins L2, C-terminal domain 67 196 IPR022669 GO:0003735|GO:0005840|GO:0006412
Bva14g00891 212 SUPERFAMILY Translation proteins SH3-like domain 67 202 IPR008991 -
Bva14g00891 212 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 45 212 - -
Bva14g00891 212 MobiDBLite consensus disorder prediction 165 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00891 Bva-Chr14 4211178 4212734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00891 64 177 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 44.167 1.36e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00891 - - lang:109347761 292.352