Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00885 ATGAATGTTCCTGTAGCTTTTAAGACAGAAGAGGTGTACAAGGAGTGCCGCCATAACCATGCAGCCTCCCTTGGCTACATCTCCTTTGATGGCTGTGGGGAATTCCTCAAACCCGACGACAACACCACCATGGACTCCATGCTCTGTGCTGCATGTGGCTGCCACCAGAATTTCCATCGGAAGAGCGTTGTTTATATCCCGGTGATGCAACCAACTCCATTCTCGAGCTTTCACAGTGAAGCTTTTGTTCCAGGGTCATCTGGTTCTGGTTTCTCGTTCATGAACGTGGAAGTTGAGATGATGACGccgaggaggaggaggaggacaGTATTCACCCCGGAGCAGAAGAATCGAATGCTGACATTTGCAGAAAAGAGTGGTTGGAGTGCCAAGAACGCTGACGGGGAAGAGCTTGAGCATTTCTGCCAACAAATGGGTATTAGCCGGAGAACCTTTATGGTGTGGCTGAGCAACAACCGCCGCCTGCAGCTGACTGAGAAGGACGACGACAAGGACACCGTAGCCAcaaatgtttg 536 0.4776 MNVPVAFKTEEVYKECRHNHAASLGYISFDGCGEFLKPDDNTTMDSMLCAACGCHQNFHRKSVVYIPVMQPTPFSSFHSEAFVPGSSGSGFSFMNVEVEMMTPRRRRRTVFTPEQKNRMLTFAEKSGWSAKNADGEELEHFCQQMGISRRTFMVWLSNNRRLQLTEKDDDKDTVATNV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00885 178 Gene3D - 94 164 - -
Bva14g00885 178 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 13 62 IPR006456 -
Bva14g00885 178 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 11 161 - -
Bva14g00885 178 ProSiteProfiles 'Homeobox' domain profile. 102 166 IPR001356 GO:0003677
Bva14g00885 178 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 11 161 - -
Bva14g00885 178 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 13 62 IPR006456 -
Bva14g00885 178 Pfam ZF-HD protein dimerisation region 12 63 IPR006456 -
Bva14g00885 178 SUPERFAMILY Homeodomain-like 101 160 IPR009057 -
Bva14g00885 178 CDD homeodomain 109 161 IPR001356 GO:0003677
Bva14g00885 178 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 104 160 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00885 Bva-Chr14 4193432 4193968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00885 13 169 ZF-HD Transcription Factor Family AT2G18350 35.165 6.85e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva14g00885 ZF-HD_dimer 3.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00885 - - lja:Lj4g3v2313490.1 131.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00885 14 4193432 4193968 Bva14g00885 14 4193432 4193968 ECH