Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00884 ATGTCGACCAGGTTCTTCAACACCAATCTGCCTCGCCTTATGGAAGAAGTAGTTGAGTACAAGGAGTGCAGGCGCAACCACGCCGCCGCCCTCGGTTTCCTCGCCTTGGACGGCTGCCAGGAATTCGTCCAGCTCGGAGAAGACGGCTCCAAGGAAGGCATGGTCTGTGCTGCGTGTGGCTGCCACCGGAATTTTCACAGGCAGCAGATTTGCTACAAGCCAGTATCCCAACCCAGCCCTGTCAATGCCGTTGCACCTGCATCTGCAAGTGCACCGGTTTGGTCTTTTACCCATGCAAGTAGTAGCAACGATGACGGCAACGCTGAGACGGTGGTGTCGATGAGGCCAAGGAGGACTAAAACAAGATTCACGCATATGCAGAAGAGGAAGCTGATTAAGTTCGCTGTGAGAATAGGGTGGAAGACCCGCCATGCTCCGGTGGTTCTTGTCGAGAGTTTCTGCAGGGAAATGGGAATCACGCGCAAAGTGTTAAGGTGTTGGCTGAGCAATAACCGCCATCTCAAGCGTTTCATCTCCGCCGCGTCCACCAACGGAAACTA 560 0.5429 MSTRFFNTNLPRLMEEVVEYKECRRNHAAALGFLALDGCQEFVQLGEDGSKEGMVCAACGCHRNFHRQQICYKPVSQPSPVNAVAPASASAPVWSFTHASSSNDDGNAETVVSMRPRRTKTRFTHMQKRKLIKFAVRIGWKTRHAPVVLVESFCREMGITRKVLRCWLSNNRHLKRFISAASTNGN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00884 186 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 174 - -
Bva14g00884 186 SUPERFAMILY Homeodomain-like 102 173 IPR009057 -
Bva14g00884 186 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 117 172 IPR006455 -
Bva14g00884 186 Pfam ZF-HD protein dimerisation region 18 69 IPR006456 -
Bva14g00884 186 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 20 69 IPR006456 -
Bva14g00884 186 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 19 69 IPR006456 -
Bva14g00884 186 Gene3D - 100 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00884 Bva-Chr14 4190035 4190595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00884 17 172 ZF-HD Transcription Factor Family AT1G14440 35.106 1.12e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva14g00884 ZF-HD_dimer 3.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00884 - - adu:107466050 129.798