Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00880 ATGGAACTTTCAGATTTGCAAAACAACAAGCAGAGAAGAAACACGAGCAGTAGTCATCTCCACCACCAGCAACACCAACAACAAAAACAGTTACCTTCTTCCCAGCTTGTGGTCCCTTTTGATGGCAGACCATCGCCCTCGTCATCAACTGGAGGACCATCCCCAGGACCCTTCATCATGGGCTCCATCTCCATCCAAGCTGGCCTCACGACCCATGGTGCAACTGCAACTGCAACCCCTTCgccttcttcctcttctctctctaactCTAATTCCAATTCTACTTCGTCTTCTTCTTccgcttctgcttctgcttctgcttcctCCACTGCTCCTCCTCACCTCATTGATGCTTCCCTCGCCATCGCCACCAGATCTGAGACCCACCCGTCTTCCCGATCTGGACCCATCGTTGATTCCGCCAAAAAAACCCAAATTCAACAACAATTATCTATCTCTACGACGACGACGACGACCGCAACTCCCGCAAACCCACCCAAGCGATCCACCAAAGACAGGCACACCAAGGTCGATGGTCGCGGCAGGAGAATTCGAATGCCGGCTACTTGTGCGGCTAGGGTTTTTCAATTGACCAGAGAATTGGGTCATAAGTCCGATGGGGAGACCATCGAGTGGCTGCTTCAGCAGGCTGAGCCGGCGATCATCGCCGCCACTGGCACCGGGACGATTCCTGCGAATTTCTCAACTCTTAACGTGTCGCTCAGGAGTAGTGGGTCTACGCTTTCAGCTCCGCCTTCAAAATCCGCTCCTCATACGTTTCATGGAGCTTTGGCTCTCGCCCATCACCCTTACGAAGAAGCTTTCCAGCATACAGCTTTGTTTCACcatcagcagcagcagcagcagcaacaagcTCAACAACAGCATCAGCAGCATCTAATGACTGCAGACCAAATTGCAGAAGCGCTTCCTAGCGGCGGTGGCGGAGGAGACAGTGGTGGTGATTCGACCGATAATTATATGAGAAAACGCTTCAGAGAGGATCTGTTCAAAGAAGACAACAATTCACATAACGACAGTGGTGGAGGAAGCTCGCCCAAGGCATTCAAAAGCAACTTGCAGTTGCCAAAGCAACAAGAAGCAGGATCTTCAGGCCTTCTTCGACCTTCAAATATTCTACCTGGCACTGCCATGTGGGCAGTGGCGCCAGCTCCGACCAGCGGTGCTGGTAGCACATTCTGGATGCTACCGGTAACTGCCGGTGGTGCTGGTGGCCATACTGTGGCTACTGCCACAGCTGCAGGGTCTGGTCCTTCAGAGACCCAGATGTGGCCTTTTCCTACAGCACAAACAGGCAGTGGAAACTTACAAGCGCCATTACACTTTATGCCAAGGTTCAACCTTCCGGGTAGTCTTGAATTTCAAGGTGGGCGAGCTGGTGGGGCTCTTCAATTGGGTTCCATGTTCATGCCTCAGCAACCATCTCAGCACCTGGGGCTAGGAATGTCTGAGTCCAACTTGGGAATGTTGGCAGCTCTAAATGCTTACTCTAGAGGTGGTTTGAACATGAATTCTGACCAACAGAATCAACCATTGGAGCATCATCATCACCAACATCAACCTCAAGGCACTGATAGTGGAGAAGAAGGTCCTAATAGCTCTCAGTG 1628 0.4883 MELSDLQNNKQRRNTSSSHLHHQQHQQQKQLPSSQLVVPFDGRPSPSSSTGGPSPGPFIMGSISIQAGLTTHGATATATPSPSSSSLSNSNSNSTSSSSSASASASASSTAPPHLIDASLAIATRSETHPSSRSGPIVDSAKKTQIQQQLSISTTTTTTATPANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHGALALAHHPYEEAFQHTALFHHQQQQQQQQAQQQHQQHLMTADQIAEALPSGGGGGDSGGDSTDNYMRKRFREDLFKEDNNSHNDSGGGSSPKAFKSNLQLPKQQEAGSSGLLRPSNILPGTAMWAVAPAPTSGAGSTFWMLPVTAGGAGGHTVATATAAGSGPSETQMWPFPTAQTGSGNLQAPLHFMPRFNLPGSLEFQGGRAGGALQLGSMFMPQQPSQHLGLGMSESNLGMLAALNAYSRGGLNMNSDQQNQPLEHHHHQHQPQGTDSGEEGPNSSQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00880 542 PANTHER TRANSCRIPTION FACTOR TCP8 15 542 - -
Bva14g00880 542 MobiDBLite consensus disorder prediction 125 166 - -
Bva14g00880 542 MobiDBLite consensus disorder prediction 1 111 - -
Bva14g00880 542 ProSiteProfiles TCP domain profile. 170 224 IPR017887 -
Bva14g00880 542 MobiDBLite consensus disorder prediction 281 302 - -
Bva14g00880 542 MobiDBLite consensus disorder prediction 125 179 - -
Bva14g00880 542 MobiDBLite consensus disorder prediction 337 357 - -
Bva14g00880 542 MobiDBLite consensus disorder prediction 343 357 - -
Bva14g00880 542 Pfam TCP family transcription factor 169 298 IPR017887 -
Bva14g00880 542 MobiDBLite consensus disorder prediction 1 55 - -
Bva14g00880 542 MobiDBLite consensus disorder prediction 64 111 - -
Bva14g00880 542 MobiDBLite consensus disorder prediction 507 542 - -
Bva14g00880 542 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 542 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00880 Bva-Chr14 4174969 4177167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00880 167 493 TCP Transcription Factor Family AT1G35560 47.112 1.13e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva14g00880 TCP 4.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00880 - - jre:109002313 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00880 14 4174969 4177167 Bva14g00880 14 4174969 4177167 ECH