Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00858 ATGGCGTCTGCTAGCCTTGGAAATGGAGGGGCCGGTAGTTCCAGGTCTGCTAACGGCTTCAGGGGTTCATCTAGTTCAGTGGATTGGCTTGGTAGAGAGATGCTTGAGATGAGGTTGAGGGACAAGGTGGACCATGACGAAGACAGAGATAGTGAGCCTGACATAATTGATGGGGTGGGTGCTGAAACAGGACAAGTGATAAGAACAAGCATTGGTGGACGAAATGGTCAATCTAAGCAGAATGTCAGTTACATTTCTGAGCACGTGATTGGAACAGGCTCTTTTGGTGTTGTTTTTCAAGCGAAATGCAGAGAAACTGGAGAGATTGTAGCCATCAAGAAGGTTCTCCAGGATAAGCGCTACAAGAATAGGGAGTTACAGATTATGCAAATGCTGGATCATCCGAATATTGTTGCCCTAAAgcattgtttcttttcaacaaCCGACAAAGAAGAGCTTTACCTGAATCTTGTACTGGAATATGTTCCTGAAACTGTTAATCGTATTGCAAGAAACTATAGCAGGATTAACCAGCGAATGCCTCTGATATATGTTAAGCTTTACACTTACCAGATATGCAGGGCCCTTGCTTATATACATAATTGTATCGGTATATGTCACCGTGACATCAAACCTCAGAACCTACTAGTAAACCCACATACGCATCAGCTGAAACTTTGTGATTTTGGGAGCGCAAAAGTATTGGTCAAAGGAGAACCAAATGTTTCTTACATCTGTTCAAGATATTATCGAGCTCCAGAACTTATATTTGGTGCAACTGAGTATACAACTGCTATAGATATATGGTCTACTGGTTGTGTAATGGCTGAATTACTTCTTGGACAGCCTTTGTTTCCTGGAGAAAGTGGAGTTGACCAACTAGTTGAGATAATCAAGGTTTTAGGAACTCCAACGAGGGAGGAGATAAAGTGCATGAACCCAAATTATACTGAGTTTAAATTTCCACAGATAAAACCTCATCCATGGCACAAGGTCTTTCAGAAACGTTTGCCGCCAGAAGCAGTGGACCTTGTTTGTAGGTTCTTTCAGTACTCTCCCAATCTGCGATGTACTGCTTTGGAAGCTTGTATACATCCCTTCTTCGATGAATTGAGAGACCCAAATACACGCCTTCCTAATGGCCGCCCACTTCCAccactttttaatttcaaatctcAGGAGCTCTCGGGCATACCACCTGATATCATCAACCGTCTTATTCCAGAGCATGCTCGCTGTAAATTATCCGGTGCATCTGAGAGAATGCCACAGAAAGAGCTCCTAggata 1289 0.4182 MASASLGNGGAGSSRSANGFRGSSSSVDWLGREMLEMRLRDKVDHDEDRDSEPDIIDGVGAETGQVIRTSIGGRNGQSKQNVSYISEHVIGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKSQELSGIPPDIINRLIPEHARCKLSGASERMPQKELLG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00858 429 ProSiteProfiles Protein kinase domain profile. 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00858 429 SMART serkin_6 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00858 429 Pfam Protein kinase domain 86 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00858 429 PANTHER SHAGGY-RELATED PROTEIN KINASE DELTA-RELATED 1 413 - -
Bva14g00858 429 Gene3D Phosphorylase Kinase; domain 1 69 163 - -
Bva14g00858 429 CDD STKc_GSK3 79 371 IPR039192 -
Bva14g00858 429 Gene3D Transferase(Phosphotransferase) domain 1 164 412 - -
Bva14g00858 429 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
Bva14g00858 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bva14g00858 429 MobiDBLite consensus disorder prediction 1 24 - -
Bva14g00858 429 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 413 - -
Bva14g00858 429 SUPERFAMILY Protein kinase-like (PK-like) 83 395 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00858 Bva-Chr14 4069259 4074847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00858 90 371 Core Cell Cycle Gene Families AT1G76540 35.172 6.61e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Bva14g00858 Pkinase 4.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00858 K03083 - jre:108983720 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00858 14 4069259 4074847 Bva13g00032 13 147325 151425 BWGD
Bva14g00858 14 4069259 4074847 Bva14g00858 14 4069259 4074847 ECH