Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00844 ATGGAAGGAAAATACAGTAGGGTTGGAAATTGCCAATGCTGGTCCCCTCAGCCGGGTAAATGGGTGAAGGGCAAATTGATTGGATCAGGGTCTTTTGGCACTGTCCATTTGGCCATTAGCAAGTCCACCGGAGGACTTTTTGTTGTGAAACAATCACGTTCAGATGCTGGACTTGAGGCTTTGGAGAATGAGGttaaaattctcaagagtTTAAAGTCATCCCCTTATATTGTACAGTGTTTGGGGATAGAAAAAAGTGAAGGCAATCTCAGTGTTCTGATGGAGTATATGGCAGGAGGCAGTGTGGCAGATGTGGCACAGAAATTTGGTGGATCATTGGAAGAAGAGGTTGTTAGGCTGTACACAAGAGAAATGCTTAAAGGGTTAAAGTATCTTCACCATCATGGGATTGTGCATTGTGATATCAAGTGCAAGAATGTCCTTTTGGGCTCATCTGGGGATATCAAATTGGCAGATTTCGGATGTGCAAAGAGGCTAGAGGACTTGAAGGGCAGTGGTGGACTGATGAAATCTTTGAATTCTATTGGTGGCACTCCCCTTTGGATGGCTCCAGAAGTTTTGAGAAATGAAAGATTGGATTCTGCAGCAGATATATGGTCTTTGGGATGCACAGTTATTGAAATGGCTACTGGAAGGCCACCCTGGGGTAGTGATGTTACAAATCCAATGGCTGCTCTTCTGAAGATTGCCCGTGGCAACGAGATACCTCAATTTCCTTCCCATTTCTCCAAGGAGGGATTGGATTTCTTGGCCAAATGCTTGGAGAGAGATCCTGCAAAGAGATGGACAGCAGACAAGTTACTAAACCATCCATTTGTTTCGGGGAAATCAAGGAGAAGTTCTCAGAGAGAACATGCTTGCTCACCTTCAAGTGTCTTAGAGGTTCAAAGATTTGATGATGGTTATGATTCAGATGAAGCAGAAACTCCTGAGGGGGATGATTTCTCAACCAGAAAACCATTCACATGGCGCCATGGTGAAGGAAAAGCAACAGCTCTATGGCCGTGGGGGGATAGTAAATTTGGGTCATCAGGAAACTGGATTGCTGTTAGATCAGGCTG 1082 0.4418 MEGKYSRVGNCQCWSPQPGKWVKGKLIGSGSFGTVHLAISKSTGGLFVVKQSRSDAGLEALENEVKILKSLKSSPYIVQCLGIEKSEGNLSVLMEYMAGGSVADVAQKFGGSLEEEVVRLYTREMLKGLKYLHHHGIVHCDIKCKNVLLGSSGDIKLADFGCAKRLEDLKGSGGLMKSLNSIGGTPLWMAPEVLRNERLDSAADIWSLGCTVIEMATGRPPWGSDVTNPMAALLKIARGNEIPQFPSHFSKEGLDFLAKCLERDPAKRWTADKLLNHPFVSGKSRRSSQREHACSPSSVLEVQRFDDGYDSDEAETPEGDDFSTRKPFTWRHGEGKATALWPWGDSKFGSSGNWIAVRSG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00844 360 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Bva14g00844 360 SUPERFAMILY Protein kinase-like (PK-like) 19 309 IPR011009 -
Bva14g00844 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Bva14g00844 360 Gene3D Transferase(Phosphotransferase) domain 1 17 318 - -
Bva14g00844 360 ProSiteProfiles Protein kinase domain profile. 21 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00844 360 CDD STKc_MAPKKK 20 280 - -
Bva14g00844 360 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 11 359 - -
Bva14g00844 360 SMART serkin_6 21 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva14g00844 360 MobiDBLite consensus disorder prediction 309 329 - -
Bva14g00844 360 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 11 359 - -
Bva14g00844 360 Pfam Protein kinase domain 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00844 Bva-Chr14 4009696 4011426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00844 18 296 MAP Kinase Kinase Kinase AT1G54960 43.051 1.60e-73 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva14g00844 Pkinase 1.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00844 K20716 - qsu:112028480 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00844 14 4009696 4011426 Bva14g00844 14 4009696 4011426 ECH