Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00839 ATGTTCATCGGTCGAAAAAATTGGGGCTTTGGAACCCTCTCTCCCCACGGTGATCGACTCATCACTAGCAGAGTGTCCTTGTGGACGCCATTAACAACTTCAAGCTCCGAATCTTCCTGTCCTCTACCTAACAAGGTTGATCTTAAGTGGGCAactgtaaaaaatataatgtcagAAGAGGCTGGGAACGTGTTAGTGGTATATGACGATCCCTCTGACCAGCGATCATTATCTTTGGATGACACAAGCAGCAGGGAGGAATCCCCTGACGAAACAAGGCTCTCCTTGGAAACGAGTCATGATGCGATTCCATATATTGGTCAAAGATTTGCCACTCATGATGCtgcttatgaattttataGTGAATTTGCCAAGAGGTGTGGCTTCTCAATTCGACGTCATCGTACAGAGGGAAAGGATGGGATTGGAAAAGGACTTACTAGACGGTACTTTGTTTGTCATCGTGCTGGTAACACTCCTGTCAAAACTTTGACTGAAAGTAAACCTCAAAGAAATCGAAAATCTTCTCGTTGTGGATGCCAGGCTTATATGCGGATAAGCAAGAGTACAGAATTAGGAGCACCAGAATGGCGTGTCACTGGTTTTGCCAATCACCATAATCACGATCTTTTAGAACCAAACCAAGTTCGATTCCTTCCTGCATACAGAACTATTTCAGATGCTGACAAAAGCCGAATCTTAATGTTTGCTAAAACGGGCATTTCTGTCCATCAAATGATGAGGCTTATGGAACTTGAGAAGTGTGTGGAACCTGGATACCTGCCTTTTACTGAAAAGGATGTCAGGAACTTACTTCAGACTTTTAGGAAATTAGACCCAGAGGAGGAAAGCATAGATTTATTAAGAATGTGCAGAAATATTAAGGAAAAAGACCCtaattttagatttgagtACACACTTGATTCAAACAACCGTTTGGAAAATATTGCTTGGTCATATGCTTCATCGATCCAGTCTTATGATATCTTTGGTGATGCGGTGGTGTTTGACACAACACACCGCCTGACTGCATTTGACATGCCCCTAGTGATATGGGTTGGAATGAACAATTACGGAATGCCTTGCTTTTTTGGTTGTGCACTTCTACGAGAAGAAAATGTTAGATCATTTTCATGGGCATTGAAGGCTTTCTTAGGGTTCATGAATGGGAAGGCTCCACAGACAATATTAACTGACCAGAACATGTGTCTCAAAGAGGCCTTAGCCATGGAAATGCCTGCAACCAAACATGCGTTCTGCATTTGGATGATTGTGGCAAAGTTTCCATCATGGTTTAATGCTAATCTTGGGGAACGTTATAATGAGTGGAAGGCTGAGTTTTATCGACTGTATAATCTTGAGTCGGTTGAGGATTTTGAAATAGGTTGGAGGGATATGGTGAATTCTTTTGGGCTGCATGCCAACAGGCACATTGCTAATTTGTATAGTTCACGCTCACTTTGGGCGTTGCCATTTTTGAGAAGCCACTTTTTTGCGGGAATGACTACAACTGGTCagtcaaaatcaattaacGCTTTCATTCAACGGTTTCTGAGTGCACAGACTCGGCTTGCCCACTTTGTAGAACAGGTAGCTGTTGCAATTGATTTCAAAGATCAAACTGGAGAACAACAAACAATGCAACAGAATCTCCAAAATATTTGCCTCAAAACAGGGGCCCCCATGGAATCTCACGCCGCCACAATCCTCACTCCATTTGCCTTCTCAAAGCTTCAAGAACAGCTTGTTTTGGCTGCACACTACGCATCTTTTCCAATAGAGGATGGTTTTCTTGTGAGGCACCATACAAAAGCTGAGGGAGGCAGGAAAGTTTATTGGTCCCCTCGGGAAGGAATCATAAGCTGCAGCTGTCACCAGTTTGAGTTCTCTGGAATTCTGTGTAGACATGCTCTTCGAGTTCTTTCAACAGGTAACTGTTTTCAGATTCCAGATAGATATCTTCCCCTTCGATGGCGTAGAATAAGCATGCCCTCTGCCAAGCTTCCTCAGAGTTCTCCTAGTGATCATGCTGAAAGAGTACAGCTATTACAAAACATGGTTTCCTCTCTGATCACAGAATCCGCCAAGTCTAAGGAAAGATTAGATATGGCAACAGAGCAAGTTTCTATCCTTCTCTCTCGAATTAGAGAGCAGCCAATTTCATCTCAAGGCGTCAGAGATACATCCACAATCAATAGGAATCTTTG 2207 0.42 MFIGRKNWGFGTLSPHGDRLITSRVSLWTPLTTSSSESSCPLPNKVDLKWATVKNIMSEEAGNVLVVYDDPSDQRSLSLDDTSSREESPDETRLSLETSHDAIPYIGQRFATHDAAYEFYSEFAKRCGFSIRRHRTEGKDGIGKGLTRRYFVCHRAGNTPVKTLTESKPQRNRKSSRCGCQAYMRISKSTELGAPEWRVTGFANHHNHDLLEPNQVRFLPAYRTISDADKSRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQTFRKLDPEEESIDLLRMCRNIKEKDPNFRFEYTLDSNNRLENIAWSYASSIQSYDIFGDAVVFDTTHRLTAFDMPLVIWVGMNNYGMPCFFGCALLREENVRSFSWALKAFLGFMNGKAPQTILTDQNMCLKEALAMEMPATKHAFCIWMIVAKFPSWFNANLGERYNEWKAEFYRLYNLESVEDFEIGWRDMVNSFGLHANRHIANLYSSRSLWALPFLRSHFFAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAIDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPIEDGFLVRHHTKAEGGRKVYWSPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPLRWRRISMPSAKLPQSSPSDHAERVQLLQNMVSSLITESAKSKERLDMATEQVSILLSRIREQPISSQGVRDTSTINRNL 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00839 735 SMART 26again6 620 647 IPR006564 GO:0008270
Bva14g00839 735 MobiDBLite consensus disorder prediction 73 98 - -
Bva14g00839 735 Pfam FAR1 DNA-binding domain 118 211 IPR004330 -
Bva14g00839 735 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 716 IPR031052 GO:0006355
Bva14g00839 735 ProSiteProfiles Zinc finger SWIM-type profile. 609 645 IPR007527 GO:0008270
Bva14g00839 735 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 68 716 - -
Bva14g00839 735 MobiDBLite consensus disorder prediction 74 97 - -
Bva14g00839 735 Pfam SWIM zinc finger 616 643 IPR007527 GO:0008270
Bva14g00839 735 Pfam MULE transposase domain 334 426 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00839 Bva-Chr14 3977888 3981870 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva14g00839 MULE 2.5e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00839 - - gmx:100810717 1279.23