Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00836 ATGATGTATGGGAAAGGAGAAGAGAGGGACTTGGAGATAGAGGGTATAAACTTGGGGCATGATGGGAAAGATGAGAGATTGGAGAGGGATAGATCATCTTCATGGTTTGTTGATGAGAAGGATAGTCTCAGAGAGCCATTGCTTTCCAAGAATAATAGGATAAACAACACTTCACAGCTCGCCATTGTTGGAGCCAACGTTTGTCCCATTGAAAGCCTTGATTACGAGATCAATGAGAATGACCTTTTTAAGCAAGATTGGAGGTCCAGAACGAAAGTTGAGATATGTCAGTATATGGCCATAAAATGGATACTTGCACTTATTATTGGTTTGAGCACAGGACTTGTAGGCTTCTGCAATAACATTGCCGTCGAGAATGTTGCTGGTTTCAAACTTTTACTCACCAACAATCTTATGCAGAAACAAAGGTATCATCTGGCTTTTGCAGCATTAGCTGCTGGTAACATGATTTTGGGCATTGCTGCTGCAGCCCTCTGTGCCTATATTGCACCTGCGGCAGCAGGTTCTGGCATACCTGAGGTGAAGGCATACCTCAATGGTGTAGATGCTCATTCTATATTGGCCCCAAGTACGCTTTTTGTCAAGatttttggttcaattttTGGAGTTTCTGCGGGACTAGTTGTGGGCAAGGAAGGACCTATGGTACATACTGGTGCATGCATAGCTAATTTACTTGGACAGGGTGGTTCACGAAAATACCATTTGACCTGCAAATGGCTTAGATTCTTTAAAAACGATCGAGACCGGAGGGACTTGATCACCTGTGGTGCAGCTGCTGGAGTTGCTGCAGCATTCCGTGCACCAGTTGGTGGGGTCCTTTTTGCTCTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTATGGCGGACTTTCTTTACAACGGCTGTGGTCGCAGTGGTGCTGAGAGGTTTCATGGAGTTCTGCCGAGCCGGGAGGTGTGGTCTCTTCGGGGAAGGAGGTTTAATAATGTTTGCTGTTAATTCCTCAAGGCCTATATACGGCACACCAGACTTGCTAGTGGTTATATTCCTCGGAGTTATTGGAGGCCTTCTGGGAAGTCTTTacaattttctcataaaaaaggTTGTTCGAACGTATAGTGTGATCAATGAGGAGGGCCCTATGCGTAAACTCTTACTTGTCTTGGCTGTCACCTTTTTGACCTCTTGCTGTTCGTTTGGCCTTCCATGGATATCACAGTGCATACCATGTCCTGCTAGCGCCGGAGACCGATGCCCCACCGTTGGTCGTTATGGACACTACAAGAGTTTCCAGTGTCCACCAAACCACTACAACGACCTTGCTTCTCTGTTTTTTACCACAAACGATGATGCCATTCGCAACCTGTTTATCTCCGGCAACGACAAGAAATTCCAGCTATCttctcttctaattttcttcGTGGCCATGTACTTCCTCGGAATTGTCACTTATGGAATTGCTGTCCCCTCTGGTCTTTTCATTCCTGTTATACTCGCCGGAGCCTCGTACGGGCGTCTTGCCGGGAGGCTTCTAAGTTCAATCACCGTTCTTGACGTGGGCTTGTTTGGACTCCTCGGAGCTGCATCTTTCCTAGGTGGCACAATGAGGATGACAGTTTCTATTTGTATTATACTTCTTGAACTCACTAATGACCTCTTGATGCTCCCATTGGTGATGCTTGTTCTGCTTATTTCAAAGTCTGTAGCTGATTGCTTCAACAATGGCGTTTATGATCAGATTATGAGATTGAAGGGTCTGCCGTATTTGGAAGCACACCCAGAGCCTTATATGAGGCAGTTAATAGCAAGCGATGTCGTTTCAGGGCCGTTGTTTACATTTTCTGGGGTTGAAAAGGTGAAGAATATAATGTGTGCTTTGAGGGGAACAGGACATAATGGGTTTCCTGTGCTTGATGAGCCTCCTTTAACTGATGCCCCTGAGCTGTGTGGGTTGGTTTTGAGGTCACATTTACTTGTGCTGCTCAAGAACAGGAGGTTCTTCAAGCAGAAGGGTATGAACAGTTCCGCCATTATGAGGAACTTCAAGGCATATGATTTCATGAAACCGGGGTCAGGCAAGGGGCTGAAGTTAGAGGATTTGGAGATTAACGAGGATGAAATGGAAATGTTTGTTGACCTCCATCCAATTACTAATACGTCACCGTATACAGTGGTGGAAACAATGTCTCTGGCAAAAGCTGCAATTCTCTTCCGCGAACTTGGCCTCAGGCACTTGCTGGTGGTGCCACAGACAACAGGAAGGCATCCAGTTGTTGGAATACTGACAAGGCATGATTTTATGCCCGAGCATGTATTGGGACTATACCCACATTTGAACCCTCATAAACAGAGGGAGTA 2366 0.451 MMYGKGEERDLEIEGINLGHDGKDERLERDRSSSWFVDEKDSLREPLLSKNNRINNTSQLAIVGANVCPIESLDYEINENDLFKQDWRSRTKVEICQYMAIKWILALIIGLSTGLVGFCNNIAVENVAGFKLLLTNNLMQKQRYHLAFAALAAGNMILGIAAAALCAYIAPAAAGSGIPEVKAYLNGVDAHSILAPSTLFVKIFGSIFGVSAGLVVGKEGPMVHTGACIANLLGQGGSRKYHLTCKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMEFCRAGRCGLFGEGGLIMFAVNSSRPIYGTPDLLVVIFLGVIGGLLGSLYNFLIKKVVRTYSVINEEGPMRKLLLVLAVTFLTSCCSFGLPWISQCIPCPASAGDRCPTVGRYGHYKSFQCPPNHYNDLASLFFTTNDDAIRNLFISGNDKKFQLSSLLIFFVAMYFLGIVTYGIAVPSGLFIPVILAGASYGRLAGRLLSSITVLDVGLFGLLGAASFLGGTMRMTVSICIILLELTNDLLMLPLVMLVLLISKSVADCFNNGVYDQIMRLKGLPYLEAHPEPYMRQLIASDVVSGPLFTFSGVEKVKNIMCALRGTGHNGFPVLDEPPLTDAPELCGLVLRSHLLVLLKNRRFFKQKGMNSSAIMRNFKAYDFMKPGSGKGLKLEDLEINEDEMEMFVDLHPITNTSPYTVVETMSLAKAAILFRELGLRHLLVVPQTTGRHPVVGILTRHDFMPEHVLGLYPHLNPHKQRE 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00836 788 Pfam CBS domain 721 769 IPR000644 -
Bva14g00836 788 CDD ClC_6_like 71 592 - -
Bva14g00836 788 Gene3D Clc chloride channel 94 592 - -
Bva14g00836 788 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 40 785 - -
Bva14g00836 788 ProSiteProfiles CBS domain profile. 719 782 IPR000644 -
Bva14g00836 788 SMART cbs_1 723 774 IPR000644 -
Bva14g00836 788 SMART cbs_1 612 665 IPR000644 -
Bva14g00836 788 PRINTS Chloride channel signature 491 511 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g00836 788 PRINTS Chloride channel signature 541 560 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g00836 788 PRINTS Chloride channel signature 579 593 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g00836 788 PRINTS Chloride channel signature 266 285 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g00836 788 PRINTS Chloride channel signature 171 188 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g00836 788 PRINTS Chloride channel signature 523 539 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g00836 788 PRINTS Chloride channel signature 202 221 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g00836 788 CDD CBS_pair_voltage-gated_CLC_euk_bac 604 772 - -
Bva14g00836 788 SUPERFAMILY Clc chloride channel 80 595 IPR014743 -
Bva14g00836 788 Pfam Voltage gated chloride channel 159 573 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bva14g00836 788 SUPERFAMILY CBS-domain pair 595 770 IPR046342 -
Bva14g00836 788 Gene3D - 593 771 IPR046342 -
Bva14g00836 788 PRINTS Plant CLC chloride channel signature 443 459 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva14g00836 788 PRINTS Plant CLC chloride channel signature 287 295 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva14g00836 788 PRINTS Plant CLC chloride channel signature 319 326 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva14g00836 788 PRINTS Plant CLC chloride channel signature 301 311 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva14g00836 788 PRINTS Plant CLC chloride channel signature 76 84 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bva14g00836 788 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 40 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00836 Bva-Chr14 3964239 3968276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00836 5 785 Ion Channels AT5G49890 73.018 0.0 1119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00836 14 3964239 3968276 Bva14g00836 14 3964239 3968276 ECH