Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00830 ATGGCATTTATGGCTTCAAATCAGATGTCTGGAGGAAACCATGCAGGGGCAACCAATGACGCTTTATACAAGGAATTGTGGCATGCTTGCGCGGGTCCCCTTGTCACTCTTCCTCGTGAAGGGGAACGAGTTTATTACTTTCCACAAGGTCACATGGAACAGCTTGAGGCATCCATGCATCAGGGATCGGAGCAGCAAATGCCTTCCTTCAACTTgccttctaaaattttatgtaaagtGGTCAATGTTCACCTTCGGGCTGAACCTGAAACAGATGAAGTATATGCACAGATCACTTTGCTTCCTGAAGCAGATCAAAGTGAGGTGACAAGCGCAGATGATCCTCTGCCAGAACCTCCCAGGTGCACAGTCCATTCATTTTGCAAGACACTTACTGCTTCTGACACCAGCACTCATGGAGGTTTTTCTGTTCTCCGGAGACATGCAGATGATTGTTTGCCACCACTGGATATGTCTCAGCAACCGCCATGGCAAGAATTGGTTGCAACTGATTTGCATGGAAATGAATGGCATTTTCGGCATATTTTTCGAGGGCAACCTAGGCGCCACTTACTCACCACTGGGTGGAGTGTCTTCGTCAGTTCCAAAAAATTAGTGGCTGGTGATGCATTTATATTTCTAAGAGATGAAAATGGAGAGCTGCGTGTTGGAGTTAGGAGGCTTATGAGACAGCAAAACAACATGCCTTCTTCTGTCATTTCTAGTCACAGTATGCATCTTGGCGTTCTGGCCACTGCTTCTCATGCCATTGCCACTGGAACACTGTTTTCTGTATTTTACAAGCCTAGAACAAGCCGATCAGAGTTTATTGTGAGTGTCAACAAGTATCTTGAAGCTCGGAGTCATAAGCTTTCTGTTGGGATGAGGTTCAAGATGAGATTTGAGGGTGATGAAGTTCCTGAAAGAAGGTTCAGTGGCACAATTGTGGGTGTTGGAGATAATAAATCACCTGTATGGACTGATTCTGAGTGGCGATCCCTAAAGGTTCAATGGGATGAACCTTCATCAATTCTGCGGCCAGATAGAGTTTCTCCATGGGAATTGGAGCCACTTGTTGCTACCACTCCTGCTAACTCCCAACCAACCCAAAGAAACAAGAGGGCACGGCCTCCGATTCTACCATCAACAATGCCTGATTCTTCTGTGCATGGTGTCTGGAAAGCACCAGCTGAATCTTCACCTTTCACATACCGTGACTCACAACATGGACGAGATCTCTATCCATCAGCCAAGTTCAATTCTGCTGCAACTagttttctgggttttggtGGGAATAGCTCTCTTGGGATTGTTTCCAACAATTCAATGTATCGGTCTAACAGGTTGGAGAACTCTACGGAGTCTTTTTCACCTTTAGCCCCCAAAGAATCGGGTGAGAAGAGACAAGCAACTGGTAATGGCTGCAGGCTTTTTGGGATTCAGCTACTTGAGAATTCTAACATAGAAGAAGGGATGCCAACAGTCGCATTGTCAGGAAGGGTGGCAGATGATGGGCCTGCCCTATCTTTAGATACGGAGTCTGACCAGCATTCTGAACCATCAAATGTAAACCGATCAGATGTTCCTTCAATGAGTTGTGATGCTGAAAAGTCATGCCTGCGGTCTCCCCAAGAGTCGCAAAGCAAGCAAATAAGGAGCTGCACAAAGGTTCATATGCAAGGAATGGCTGTTGGGAGGGCTGTGGATTTGACACGGTTTGATGGCTATGAGGATCTGCTCAGGAAGCTGGAGGATATGTTTGACATCAAGGGCGAGCTTTCTGGATCCACAAAAAACTGGCAGGTTGTCTATACTGATAATGAAGATGATATGATGATGGTTGGAGATGATCCATGGCATGAGTTCTGTAGCGTGGTAAGGAAAATCTTCATCTACACCGTAGAAGAGGTGAAGAAGCTTTCACCGAAAATAGGACTTCCAATTAATGATGAAGCTAAACCAGGCAAGCTGGATTCTGAGGCAGCAGTCAATACCGAGGACCAGTCATCAATTGTGGGGCCTGGCTGCTA 2030 0.4532 MAFMASNQMSGGNHAGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMHQGSEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSADDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRDENGELRVGVRRLMRQQNNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSPVWTDSEWRSLKVQWDEPSSILRPDRVSPWELEPLVATTPANSQPTQRNKRARPPILPSTMPDSSVHGVWKAPAESSPFTYRDSQHGRDLYPSAKFNSAATSFLGFGGNSSLGIVSNNSMYRSNRLENSTESFSPLAPKESGEKRQATGNGCRLFGIQLLENSNIEEGMPTVALSGRVADDGPALSLDTESDQHSEPSNVNRSDVPSMSCDAEKSCLRSPQESQSKQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEDMFDIKGELSGSTKNWQVVYTDNEDDMMMVGDDPWHEFCSVVRKIFIYTVEEVKKLSPKIGLPINDEAKPGKLDSEAAVNTEDQSSIVGPGC 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00830 676 MobiDBLite consensus disorder prediction 511 552 - -
Bva14g00830 676 PANTHER AUXIN RESPONSE FACTOR 1 19 638 - -
Bva14g00830 676 SMART B3_2 127 229 IPR003340 GO:0003677
Bva14g00830 676 Gene3D - 547 641 - -
Bva14g00830 676 MobiDBLite consensus disorder prediction 657 676 - -
Bva14g00830 676 SUPERFAMILY CAD & PB1 domains 554 629 - -
Bva14g00830 676 Gene3D - 124 229 IPR015300 -
Bva14g00830 676 Gene3D - 290 363 - -
Bva14g00830 676 Pfam Auxin response factor 253 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva14g00830 676 MobiDBLite consensus disorder prediction 662 676 - -
Bva14g00830 676 MobiDBLite consensus disorder prediction 362 392 - -
Bva14g00830 676 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 638 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva14g00830 676 Pfam B3 DNA binding domain 127 227 IPR003340 GO:0003677
Bva14g00830 676 CDD B3_DNA 125 227 IPR003340 GO:0003677
Bva14g00830 676 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Bva14g00830 676 Pfam AUX/IAA family 546 642 IPR033389 -
Bva14g00830 676 ProSiteProfiles PB1 domain profile. 552 645 IPR000270 GO:0005515
Bva14g00830 676 SUPERFAMILY DNA-binding pseudobarrel domain 115 256 IPR015300 -
Bva14g00830 676 MobiDBLite consensus disorder prediction 499 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00830 Bva-Chr14 3924309 3930922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00830 4 670 B3 DNA Binding Superfamily AT1G59750 71.791 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva14g00830 AUX_IAA 2e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00830 K14486 - gmx:100793224 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00830 14 3924309 3930922 Bva14g00830 14 3924309 3930922 ECH