Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00822 ATGGACGAGACCCTAGCCCCTGCACCAAAACCTACTGAAATTCCAGCTTATAGTACTGCTGTTGCTGCAtctgaagagaaagaagagaatgcGAAAAACGCAGATGAAACCATGCACGATGTGGAAGATGATTCTAATGCTTCCAGCTCTGGTTCTGATGATGATTCTGATGGTTCTGACTCCGAAGATGAAGCTCAGCAAAACCTCCAACTCCAAACCCTCCAGTCTCAGCTCTCTGCTAATCCCTACGACTATGATGCCCATGTGCAATATATAAAGCTTTTGAGGAGAATGGGTGATATTGAAAAGCTGAGAAAAGCGAGGGAAGCTATGAGTGATCTGTTTCCATTGAGTCCCTCAATGTGGCAAGAATGGACCAAAGATGAAGCTTCCCTCAATACCGGGTCTGATGCTTTCTCTGCAATTGTTAAGCTTTATGAGCGTGGGGTCTTTGATTATCTGTCTGTCTCTCTTTGGTGTGACtatcttaattttgttcaagAGTTTGATCCAACAATACGTGAACGTTCTGCTGCTGGTATTTCTAAGGCAAGAGATCTATTTGAGCGTGCTCTTACTGCAGCTGGTTTGCATATTTCTGAAGGCAGTAAAATATGGGAAGCATACAGGGAATATGAGCAAACAATACTTCTTACCATTGATGAGACTGATATACAGGCAAAGGAAAAGCAGGTTGAACGTGTACGTAGTTTATTTCACCGTCAGTTGTCTATTCCCCATAGTAATATGAGTTCAACACTTGCTGCCTATAAGGCTTGGGAGGTGGAACAGCGTAATATCGATGCTGAATCTTATGATATAGCAGCAACTTATCCACATGTTTCCTCAGCTTACCAGAAGGCCTTGGAGATGTATAATGCTCGTGTTCATCATGAAGAACAGATTTCTAGCCAGGATATATCTGAATCAGAAAGACTAACATGCTATATGAactatttgaaatttgaacagTCTTCTGGAACGCCACCGAGAGTTCAAGTTTTATATGAGCGAGCTGTTACTGACTTGCCTATATCACCTGCTCTCTGGCTTGATTATACTCGCTACTTGGACAAAACTTTGAAGGTTGGTACTGTTGTAAGCAATGTTTATTCTAGGGCCACAAAGAACTGTTCGTGGGTTGGACAACTATGGTCTCGTTATTTGCTTTCCTTGGAGCGTGGCCATGCTTCAGAGAAAGACATAGCTGCGGTCTTCGAGAAATCCATGCAATGCACCTTTTCAACTCTTGATGAGTACCTTGACTTATTTCTCACCCGAGTAGATGGCTTAAGGCGGAGAATGGCGTCTTCTCGTGAAGAGGATAAGTtggattataaaataattagggAGACCTTCCAGCGTGCAGCAGATTACCTGTCACTGCACTTGAAGAATACAGACGCCTTTTTGCGCTTACATGCTTATTGGGCCCTTTTAGAGAGAACACTTGGAAAGGATATTAGTGCTGCTCGAGGAGTTTGGGAGAGTTTTCTTAAGATCTGTGGTTCAATGTTGGAAGCatggaaaaattatatagcaCTGGAAATTGAATTGGGTAATTTAAATGAAGCTAGGTCCATATACAAGAGATGCTACACGAAGAGATTTCCTGGAACTGGATCAGAGGATATATGCAATTCATGGTTACGCTTTGAGAGGGAGTTTGGCACATTGGAAGATTTTGATCATGCCTTTCAAAAGGTCACTCCTCGTCTAGAAGAGCTACAGTTATTTAGGGTACAGCAGGAATCCAAGTCAACAGAGGAGAAAGAAGTTCATCCAAAGAGAAATGCCCATGACAAGAGAAAGATGGGGTCAGACATAACTGATGAACAGTCTCCAGCAAAGCGAAGGAGAGATGCACTGAGAAACCCAAAGAAAGCACCTGAGGAGAGTAAAGTCCAAGTTGAGAAGTTCTCTCAGGAGACGAAAGTGGAACAGGTCGATGAGAAGGTTAAGGAATCTGATAATATAACAGAACAGTCCACCTTGGAAAAGAATAGGGAATTCTCTGACCAGTGCACTGCCTTTATCTCTAATCTTCCCTTTACGGCAACCGAGCAACATATTCGTAAATTCTTCAGTGATATTGGTGGAGTTGTTGCCGTTCGAGTTCTGCATGACAAGTACACTGGAAAATCAAGGGGACTAGCATATGTGGATTTCTCAGATGATGACCACCTTGCTGCAGCAGTAGCTATGAACAAGCGAAATTTACTTGGGAAGAGGCTGAGTATTGCTCGTTCTAATCCAAATCGAGGCAGAAAGGAATCTTCTGCATACGGCCCTGATCGATCCGGGCAAGCATTGAAAGAATCTGATGAGGCCTCACAAGGGACCGTAAAGGAAGCAAAGTCTGCTCCTACTAGAAAGCTTGGAGGTGATAACTTCCAGCTCAAGGGGAAGAACACTTTTGCCGCACCGAGAAACGTCAGAGCACTTGGTTGGAGTGCAAATAAACCAAAGACTGAAGAGGGGGACGAGACGCCAAAATCCAATGAAGAATTCAGAAAGATGTTTGTGAAAAAAGATTA 2537 0.419 MDETLAPAPKPTEIPAYSTAVAASEEKEENAKNADETMHDVEDDSNASSSGSDDDSDGSDSEDEAQQNLQLQTLQSQLSANPYDYDAHVQYIKLLRRMGDIEKLRKAREAMSDLFPLSPSMWQEWTKDEASLNTGSDAFSAIVKLYERGVFDYLSVSLWCDYLNFVQEFDPTIRERSAAGISKARDLFERALTAAGLHISEGSKIWEAYREYEQTILLTIDETDIQAKEKQVERVRSLFHRQLSIPHSNMSSTLAAYKAWEVEQRNIDAESYDIAATYPHVSSAYQKALEMYNARVHHEEQISSQDISESERLTCYMNYLKFEQSSGTPPRVQVLYERAVTDLPISPALWLDYTRYLDKTLKVGTVVSNVYSRATKNCSWVGQLWSRYLLSLERGHASEKDIAAVFEKSMQCTFSTLDEYLDLFLTRVDGLRRRMASSREEDKLDYKIIRETFQRAADYLSLHLKNTDAFLRLHAYWALLERTLGKDISAARGVWESFLKICGSMLEAWKNYIALEIELGNLNEARSIYKRCYTKRFPGTGSEDICNSWLRFEREFGTLEDFDHAFQKVTPRLEELQLFRVQQESKSTEEKEVHPKRNAHDKRKMGSDITDEQSPAKRRRDALRNPKKAPEESKVQVEKFSQETKVEQVDEKVKESDNITEQSTLEKNREFSDQCTAFISNLPFTATEQHIRKFFSDIGGVVAVRVLHDKYTGKSRGLAYVDFSDDDHLAAAVAMNKRNLLGKRLSIARSNPNRGRKESSAYGPDRSGQALKESDEASQGTVKEAKSAPTRKLGGDNFQLKGKNTFAAPRNVRALGWSANKPKTEEGDETPKSNEEFRKMFVKKD 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00822 845 MobiDBLite consensus disorder prediction 1 67 - -
Bva14g00822 845 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 678 745 IPR000504 GO:0003723
Bva14g00822 845 Gene3D Tetratricopeptide repeat domain 306 598 IPR011990 GO:0005515
Bva14g00822 845 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 675 752 IPR000504 GO:0003723
Bva14g00822 845 MobiDBLite consensus disorder prediction 584 667 - -
Bva14g00822 845 MobiDBLite consensus disorder prediction 748 845 - -
Bva14g00822 845 Coils Coil 24 44 - -
Bva14g00822 845 MobiDBLite consensus disorder prediction 822 845 - -
Bva14g00822 845 Gene3D - 640 785 IPR012677 -
Bva14g00822 845 Gene3D Tetratricopeptide repeat domain 75 275 IPR011990 GO:0005515
Bva14g00822 845 MobiDBLite consensus disorder prediction 25 43 - -
Bva14g00822 845 SMART rrm1_1 676 748 IPR000504 GO:0003723
Bva14g00822 845 CDD RRM_SF 678 747 - -
Bva14g00822 845 SUPERFAMILY RNA-binding domain, RBD 670 765 IPR035979 GO:0003676
Bva14g00822 845 SMART hat_new_1 486 518 IPR003107 GO:0006396
Bva14g00822 845 SMART hat_new_1 179 215 IPR003107 GO:0006396
Bva14g00822 845 SMART hat_new_1 99 131 IPR003107 GO:0006396
Bva14g00822 845 SMART hat_new_1 362 394 IPR003107 GO:0006396
Bva14g00822 845 SMART hat_new_1 230 263 IPR003107 GO:0006396
Bva14g00822 845 SMART hat_new_1 327 359 IPR003107 GO:0006396
Bva14g00822 845 SMART hat_new_1 137 168 IPR003107 GO:0006396
Bva14g00822 845 SMART hat_new_1 520 555 IPR003107 GO:0006396
Bva14g00822 845 PANTHER EMBRYO DEFECTIVE 140 28 839 - -
Bva14g00822 845 MobiDBLite consensus disorder prediction 47 62 - -
Bva14g00822 845 SUPERFAMILY TPR-like 76 573 IPR011990 GO:0005515
Bva14g00822 845 Pfam Lsm interaction motif 828 843 IPR008669 -
Bva14g00822 845 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 28 839 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00822 675 747 Eukaryotic Initiation Factors Gene Family AT2G23350 33.784 6.80e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00822 K22611 - gmx:100801333 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00822 14 3837045 3850825 Bva14g00822 14 3837045 3850825 ECH