Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00815 ATGGCAATTGCAGCAAACTCATCGTCTTCCACCATGAGCCTAAGCCTAAGCAACAGCCACAGCCATAGCCATGATGACACCACCACCTCGGCCACCAACgataacaacaataacaagCCCGATGACGAGCACGACCACGACATGGTCATGCCCGGTTTTCGCTTCCATCCAACTGAAGAAGAGCTCGTGGAGTTCTACCTTCGCCGTAAGGTTGAGGGAAAGCGCTTCAATGTTGAGCTAATTACTTTCCTTGATCTTTATCGCTATGACCCTTGGGAACTTCCTGCCTTGGCGGCAATTGGGGAGAAGGAATGGTACTTTTATGTGCCTAGAGATAGGAAGTATCGGAACGGTGATCGTCCGAACCGGGTTACTACTTCTGGGTACTGGAAGGCAACCGGAGCAGATAGAAtgataaaaacagaaaatttccGGTCAATTGGGTTGAAGAAAACCCTAGTTTTCTATTCTGGGAAAGCTCCGAAGGGCATCCGAACCAGTTGGATTATGAACGAGTATCGCTTGCCTCAGCATGAAACTGAGCGATATCAAAAGGCTGAGATATCACTTTGCCGTGTCTATAAAAGACCTGGAGTAGAAGACCATCCTTCACTTCCTCGCTGTCTCCCAACCCGGCCATCTTCGTCGAGAGCTTCACATTCAGATCAAAAGAATAAGCAGAGCGAAATGGTTCATCAGAACATGGGGTTTGTGGCACAATCACAGCAAATTGATCAAATAGttgacaaaataaacgaaGTTGAAGGAAGCAGCACCGTAGGTTCAGATCATGTCACTACAGCCCTTGGACTCTCCCATCAGCACAATAATGCTTACCGTACTGCAATGGGTGCATTTATTAGCACAACAATGGGGCTGCCAGTTCAGACGGAGGATGAAGGGTTAATGCTtatgcagcagcagcaaccaAAGCAACCACAAGCAGCCTCCTCCTCATTAATTCCGGCCACCTTCTTCGGCCCTGCCGGGGCGGTTTCTTCTACTAATGCAATGGTGGATGATCTGAATAGGCTAGTAAGTTATCAACAACAATACTACAATGCTCAAAGTCATCAGCACCCCAATAATCAGTTCTCTAATTTTCTAATGCAATCACAACCAATGGCTCTCAACTCGCTGCCAAATTCACTCCCAACGACATTCCCCGACAGACTGTGGGAGTGGAATCCAATCCCAGAGACGTCAAACCGGCAGTACAGCAACATGTCCTTCAAGTA 1238 0.4532 MAIAANSSSSTMSLSLSNSHSHSHDDTTTSATNDNNNNKPDDEHDHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRCLPTRPSSSRASHSDQKNKQSEMVHQNMGFVAQSQQIDQIVDKINEVEGSSTVGSDHVTTALGLSHQHNNAYRTAMGAFISTTMGLPVQTEDEGLMLMQQQQPKQPQAASSSLIPATFFGPAGAVSSTNAMVDDLNRLVSYQQQYYNAQSHQHPNNQFSNFLMQSQPMALNSLPNSLPTTFPDRLWEWNPIPETSNRQYSNMSFK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00815 412 Pfam No apical meristem (NAM) protein 51 175 IPR003441 GO:0003677|GO:0006355
Bva14g00815 412 ProSiteProfiles NAC domain profile. 49 196 IPR003441 GO:0003677|GO:0006355
Bva14g00815 412 PANTHER NAC DOMAIN-CONTAINING PROTEIN 72-LIKE 29 407 - -
Bva14g00815 412 Gene3D NAC domain 58 199 IPR036093 GO:0003677|GO:0006355
Bva14g00815 412 MobiDBLite consensus disorder prediction 201 228 - -
Bva14g00815 412 MobiDBLite consensus disorder prediction 1 36 - -
Bva14g00815 412 SUPERFAMILY NAC domain 49 196 IPR036093 GO:0003677|GO:0006355
Bva14g00815 412 MobiDBLite consensus disorder prediction 1 50 - -
Bva14g00815 412 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 29 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00815 Bva-Chr14 3791422 3793964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00815 48 212 NAC Transcription Factor Family AT2G02450 92.121 1.12e-114 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva14g00815 NAM 3.2e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00815 14 3791422 3793964 Bva14g00815 14 3791422 3793964 ECH