LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva14g00808	ATGGATCACACTGTACGAGTACTTCTGCTGTTTGTGTTCAACTATTTGTTGGCTGCAGTAGCAGAAACAGCAAATGAGGACTACAGCGCCTTACAAGGTCTTATGAATGGTTTCCTGAAGAAACCTGACAGCTGGGATGGTCCTGATCCATGCGGTGGATCATGGATCGGAATTAAGTGCAATGATTCACGTATTACATCCATAACATTGCCAAGCATGAATTTGAAAGGCCGACTTGCTGATGatattggatttttatctgaattacaGGATTTGGATCTGTCTTACAATAGGGGCTTAACAGGACCACTTCCACAAAAAATTGGGAATTTGAAGAAGCTATCAAGCTTATCTCTTGTTGGTTGTAATTTCACTGATCCTATACCAGACACAATAGGACAACTACAGCAGCTTGTCTTCTTATCGCTAAATTCTAACAGCTTCAGTGGACGAATTCCGCCTTCTATTGGTAATCTATCAAACCTTAGTTGGCTAGACTTAACAGACAACCAGCTTGAAGGTCCCATCCCAGTATCTAGTGGTACAACTCCGGGTCTTGATAAGCTATACAAGGCACAGCACTTTCATCTTGGGATGAATAAGCTTTCAGGCCAAATTCCTCCTCAACTTTTTAACTCGGAATTGACACTCATACATGTGCTACTTGATCAGAATCAACTTAGTGGAAATATTCCTCCAACACTTGGACTCGTTCTTGATCTGGAGGTGGTGCGTTTTGATGGTAATTCATTAAGTGGATCTGTGCCTCAGAGCCTCAAAAATCTTACAAATGTTCAACAACTgGTCTTGTCTAACAATAAGCTGTCAGGTCCCTTGCCAGACCTTGGTGAAATGAAACGTCTCAATTACCTGGATATGAGCAACAATAGCTTTGAATCGTCGGAATTCCCAAGATGGTTTTCATATCTAGAGAATCTGGTAACATTAATGATGGAGAATACTAATCTTGAAGGACAAATTCCAGATTCTTTGTTTAACCTTGCATCTTTACAGATTGTGAAGCTGAatgacaacaaaataaatggaaCCTTAGTAGTTAACGGCACCACCAGAGGCAATCAACTGCGACTTGTTAATTTGCAGAGGAATTCAATTGAGAAATTTGTGCCACAAGATGGACTCCAAAATGTCACGATAATACTTTTGGATAATCATATTTGCCGTGAAACTGGAATGGCATCAAAGCCTTACTGCTCTACTTCATCTCCAGCTCAACCTCCATCCAGTATCTCAGATATACCACAGCCAAGTAACTGTCCTGAAAAGTGCAATGAGCCGGATCAGATTCCTAGTCCCAAATGCATATGTGCATATCCCTATCAAGGAACTTTAAAATCAAGAGTGCTTTTGAACTTTCCAGACCAATACTTTGCAAAACTCGAAAATGGtcttatgttttctttccgAACTTATCATCTGCCTGTGGATTCAGTTTCTTTCAGCAACCCGACTGAGAATTTGTTTCCTGGTCCATTGAATTTGGGCTTGAAAGTTTTCCCATCAGGCCAGGAAGGTTTCAATCATACAGGGCTTTCTAATATAGCCTCTTTGCTAAGCAATCTGAGCTATGAGTTTGAACCTCCTGAACTGTTTGGACCACTTGATTTCGTCGCTGAAGACTATGGACACTATGaagaaaattccaAAGGGAGGGATTCGCTAAGTACTGCTGTCATAATAGGAGTAGCAGTTTGTGGTTCTCTCTTGCTGGTTTTAGCACTCCTTGCAGGTGTTTATGCCTTCCGCCAAAAGAAAAGGGCAGAAAGAGCAATTGAAAGAACTGATCCTTTTCGAAGCTGGGATACAAATGAGAGAAATAGTGCCATTCCTCAGTTGAAAGGAGCAAGACACTTCTCTTTTCAAGAGCTTCAAAAATACACCAAAAATTTTTCGCAAGACAATGAAATCGGATACGGAGGCTACGGGAAGGTTTATGGGGGAACTCTTCCCAATGGGCAGCTGATAGCCATAAAACGAGCTCAAAATGTATCCTTGCAGCGTGGGCTTGAGTTTAAAGCTGAGATTGAACTCCTTTCAAGGGTCCACCACAAGAACCTTGTAAGCCTTGTGGGGTTCTGCTTTGAGCCAGATGAACAAATGCTGGTTTATGAATATGTTCCAAATGGAACTTTAAAGGATAGTCTTTCAGGGAAATCAGGTATTAGATTGGATTGGACTAGAAGGCTAAAAGTAGCCCTTGGTGCTGCCAGGGGATTGGCTTATCTGCATGAGCTTGCTGATCCTCCTATCATACACAGGGACATCAAGTCAAACAACATTTTGCTGGATGAGCGCTTGAATGCCAAAGTTtctgattttggtctttctaagCCTTGGGCTGATTGTGAAAAAGATCATATGACCACTCAAGTTAAAGGAACATTGGGTTATCTGGATCCTGAGTATTACACATCTGAACATTTGACTAAAAAGAGTGACgtttatagttttggagtaCTTATGTTGGAGCTGATAACTGCAAGAAAGCCCATAGAACGAGGACaatatattgtaaaaatagttagaaaagaaattgataagaCAAAAGAGTTATATGGTCTTCATGGTCTTGTTGACCCTGCAATTGGTTTAAGTTTAACATTACCGAGCTTTGAGAAATTTGTGGATCTTACAATGAACTGTCTTGAAGAATCAAGTACTAACAGGCCTACAATGACTGATGTGGTAAGAGAAATTGAAAGCATGTTGCTGCAAGCTGGTCCAAACCTCACCCCTGAATCAGCTTCTACTTCAGTTAGTTTTGAGGATGTAAGTAAGGGTTCCCACCATCCTTACAGCAACGAGTCCTTTGATTCAAGTGCAGTAAATTCAAGTACAACAATAAAGGGAAAATGCTG	2879	0.3935	MDHTVRVLLLFVFNYLLAAVAETANEDYSALQGLMNGFLKKPDSWDGPDPCGGSWIGIKCNDSRITSITLPSMNLKGRLADDIGFLSELQDLDLSYNRGLTGPLPQKIGNLKKLSSLSLVGCNFTDPIPDTIGQLQQLVFLSLNSNSFSGRIPPSIGNLSNLSWLDLTDNQLEGPIPVSSGTTPGLDKLYKAQHFHLGMNKLSGQIPPQLFNSELTLIHVLLDQNQLSGNIPPTLGLVLDLEVVRFDGNSLSGSVPQSLKNLTNVQQLVLSNNKLSGPLPDLGEMKRLNYLDMSNNSFESSEFPRWFSYLENLVTLMMENTNLEGQIPDSLFNLASLQIVKLNDNKINGTLVVNGTTRGNQLRLVNLQRNSIEKFVPQDGLQNVTIILLDNHICRETGMASKPYCSTSSPAQPPSSISDIPQPSNCPEKCNEPDQIPSPKCICAYPYQGTLKSRVLLNFPDQYFAKLENGLMFSFRTYHLPVDSVSFSNPTENLFPGPLNLGLKVFPSGQEGFNHTGLSNIASLLSNLSYEFEPPELFGPLDFVAEDYGHYEENSKGRDSLSTAVIIGVAVCGSLLLVLALLAGVYAFRQKKRAERAIERTDPFRSWDTNERNSAIPQLKGARHFSFQELQKYTKNFSQDNEIGYGGYGKVYGGTLPNGQLIAIKRAQNVSLQRGLEFKAEIELLSRVHHKNLVSLVGFCFEPDEQMLVYEYVPNGTLKDSLSGKSGIRLDWTRRLKVALGAARGLAYLHELADPPIIHRDIKSNNILLDERLNAKVSDFGLSKPWADCEKDHMTTQVKGTLGYLDPEYYTSEHLTKKSDVYSFGVLMLELITARKPIERGQYIVKIVRKEIDKTKELYGLHGLVDPAIGLSLTLPSFEKFVDLTMNCLEESSTNRPTMTDVVREIESMLLQAGPNLTPESASTSVSFEDVSKGSHHPYSNESFDSSAVNSSTTIKGKC	959

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva14g00808	959	SUPERFAMILY	Protein kinase-like (PK-like)	623	937	IPR011009	-
	Bva14g00808	959	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	7	945	-	-
	Bva14g00808	959	Gene3D	Ribonuclease Inhibitor	182	395	IPR032675	-
	Bva14g00808	959	ProSiteProfiles	Protein kinase domain profile.	637	910	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva14g00808	959	ProSitePatterns	Protein kinases ATP-binding region signature.	643	665	IPR017441	GO:0005524
	Bva14g00808	959	MobiDBLite	consensus disorder prediction	404	431	-	-
	Bva14g00808	959	MobiDBLite	consensus disorder prediction	914	959	-	-
	Bva14g00808	959	MobiDBLite	consensus disorder prediction	937	959	-	-
	Bva14g00808	959	MobiDBLite	consensus disorder prediction	914	931	-	-
	Bva14g00808	959	Pfam	Leucine rich repeat N-terminal domain	24	61	IPR013210	-
	Bva14g00808	959	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	757	769	IPR008271	GO:0004672\|GO:0006468
	Bva14g00808	959	SUPERFAMILY	L domain-like	48	391	-	-
	Bva14g00808	959	SMART	serkin_6	637	910	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva14g00808	959	Gene3D	Phosphorylase Kinase; domain 1	607	712	-	-
	Bva14g00808	959	Pfam	Protein kinase domain	638	904	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva14g00808	959	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED	7	945	-	-
	Bva14g00808	959	Gene3D	Ribonuclease Inhibitor	24	181	IPR032675	-
	Bva14g00808	959	Gene3D	Transferase(Phosphotransferase) domain 1	713	925	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva14g00808	Bva-Chr14	3739898	3745546	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva14g00808	8	948	Receptor kinase-like Gene Family	AT5G49760	52.476	0.0	883

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Bva14g00808		Pkinase	1.6e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva14g00808	-		-	gmx:100811702	1106.28