Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00788 ATGTATCAAACTGTTCCTAGTTCAAATCTAGTGGGCAGCAACTCGTTAGTTCATGATCAGCATTTAGATTGTGGTGGCAGAACAATGGATCCCGCAAATGGAGGAAACAATCTTAACAACCCTAACCTCTCATCAAGGCAAAGGCTGCGCTGGACACACGAGCTTCACGAACGCTTTGTTGATGCTGTGGCACAACTTGGTGGACCAGACCGTGCCACACCTAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGATTAACAATATACCATGTCAAAAGTCATTTACAGAAATATCGACTTGCAAAATACCTTCCCGATTCCTCTTCTGATGGGAAAAAAGCCGACAAGAAAGAAGCAGGGGATATGCTTTCTGATCTAGACGGTTCATCTGGGATGCAAATTACTGAAGCATTAAAGCTGCAAATGGAGGTACAGAAGCGGCTACACGAGCAACTGGAGGTGCAGAGGCAGCTACAATTAAGAATAGAAGCCCAAGGTAAGTACTTGAAGAAGATAATTGAAGAGCAACAAAAGCTGAGTGGGGTTATTTCAGAATCAGAAGCCCCTGGTCCTGGGGTTGCAGCCCCCCAAGAAACGGACAATAAGACTGACCCAGCAACCCCTGCCCCAACATCTGAGTCCCCCCTTCAGGAAAAAGCTGCAAAAGAACGCGCTTCAGTTGATGAATCTTTTTCGTCTCACGATGAACCATTGACGCCGGATTCTAGTTGCTCCCCTACTGACACTGACAGCCCTAAAGCTGAGAGATCAACAAAGAAGCGAAGGGTGAGTGTGGAGGGAGATATGTTGCTTCCTCATCAGATATTGGAGTCAAGCGTCTCATCGTACCAGCCAACAAGCAATGTTTTTCTTACTCGAGATCCTTCATTGGGTAGAAATAATGAGGAGTTGGAAAAAGTTGCTGGCAGCAATCTGTG 938 0.4606 MYQTVPSSNLVGSNSLVHDQHLDCGGRTMDPANGGNNLNNPNLSSRQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKEAGDMLSDLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQKLSGVISESEAPGPGVAAPQETDNKTDPATPAPTSESPLQEKAAKERASVDESFSSHDEPLTPDSSCSPTDTDSPKAERSTKKRRVSVEGDMLLPHQILESSVSSYQPTSNVFLTRDPSLGRNNEELEKVAGSNL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00788 312 MobiDBLite consensus disorder prediction 106 123 - -
Bva14g00788 312 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Bva14g00788 312 Pfam MYB-CC type transfactor, LHEQLE motif 132 178 IPR025756 -
Bva14g00788 312 MobiDBLite consensus disorder prediction 217 235 - -
Bva14g00788 312 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Bva14g00788 312 MobiDBLite consensus disorder prediction 236 251 - -
Bva14g00788 312 MobiDBLite consensus disorder prediction 252 267 - -
Bva14g00788 312 MobiDBLite consensus disorder prediction 21 43 - -
Bva14g00788 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Bva14g00788 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 4 294 - -
Bva14g00788 312 Coils Coil 135 155 - -
Bva14g00788 312 MobiDBLite consensus disorder prediction 105 128 - -
Bva14g00788 312 MobiDBLite consensus disorder prediction 200 214 - -
Bva14g00788 312 MobiDBLite consensus disorder prediction 183 312 - -
Bva14g00788 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 294 IPR044848 GO:0003700
Bva14g00788 312 MobiDBLite consensus disorder prediction 275 295 - -
Bva14g00788 312 Gene3D - 45 104 - -
Bva14g00788 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 47 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00788 Bva-Chr14 3644321 3647348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00788 81 312 G2-like Transcription Factor Family AT2G01060 64.777 6.67e-92 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva14g00788 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00788 - - tcc:18597377 402.519