Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00759 ATGAAACGTCCTGACGATATTGCTGTCTCCCTAGCTTCGTCGGCTCCTTCTTCTTCGGCCTCTGCCGCCAAACCCGTGTTCTTGACTAAAGCCCAACGCGAACAGTTGGCACTTCAACGCCGACAAGAAGAAATCGCCGAACAGAGACGCCGCCAGGAACAACTGCTTTCCCTTAACCGCCCTTCGGATCCTACTGCCGATACTAGACCCTCCGATTCCGACAGAAGGGACCGTGACCGTGACCGCGACCGCGACCGCGACCGAGACAGAGACCGGGACCGGGACCGGGACCGGGATCGGGACCGTGACCGCGAACGTGATCGTGAAAGGGACAGGGAGAGGGATAGGGCTCGGGATCGGGATCGGGATCGGGACCGTGAGTCGGAGAGACGGAACCGAGAAAGGGAGCGTGAAGAAGAAGCTAGGGTTCGTGAGCGTGCTCGCTTGGAGAAGTTAGCGGAGCGGGAGCGTGATAAAGAGCTTGATGCCATCAAAGAGCAATACCTTGGTTCTAAAAAGCCAAAGAAGCGGGTTATCAAACCCAGTGAGAAGTTCCGATTCTCCTTCGACTGGGAGAATACTGAGGATACTTCTCGTGACATGAATTCGCTCTACCAGAATCCACATGAGGCTCAGTTACTATTTGGACGGGGCTTTCGTGCTGGCATGGACCGCCGTGAGCAGAAGAAACTTGCTGCTAAGAATGAGAAGGAGATGCGTGAGCAAATTCGCAAGAAGGAGGGTGTTGAGGAGAAGCCAGAAGAAGCTGCTgctcaaaaaatgaaagaggcTGCTGCGGACCTCTATGACACCTTTGACATGAGAGTGGACCGCCACTGGACTGAGAAGAAGCTTGAAGAGATGACTGAGAGGGATTGGCGTATCTTCAGAGAGGACTTCAACATCTCCTACAAGGGTTCCAAAATTCCTCGCCCAATGCGGAGCTGGTCTGAGAGTAAATTGAGTGCTGAGCTATTGAAGGCTGTTGAGAAGGCTGGGTATAAGACCCCTTCTCCAATTCAGATGGCTGCCATTCCGCTGGGGCTGCAGCAGCGTGATGTCATTGGCATTGCTGAGACTGGTTCAGGTAAAACTGCTGCCTTTGTTCTTCCCATGTTGAGTTACATCACTAGGCTTCCTCCCATGAGCGAAGAGAATGAGGCTGAGGGCCCCTACGCTGTTGTTATGGCACCTACACGTGAGCTTGCTCAGCAGATTGAGGATGAGACGGTGAAGTTTGCCCAATATCTGGGCATCAAAGTGGTTTCCATTGTTGGGGGACAGTCAATTGAGGAGCAAGGTTTTAGGATAAGACAGGGTTGTGAAATTGTAATTGCAACACCTGGTCGTTTACTTGACTGCTTGGAGCGGCGTTATGCTGTTCTGAATCAATGCAATTATGTCGTTCTTGATGAGGCTGACCGTATGATAGATATGGGATTTGAGCCACAGGTAATGGGTGTACTGGATGCTATGCCTTCCAGCAATCTGAAAccagaaaatgaagatgagGAGCTTGATGAGAAGAGAATTTACAGAACCACGTATATGTTCAGTGCTACCATGCCTCCGGCAGTGGAGCGGCTTGCTAGGAAGTACCTAAGGAACCCTGTTGTAGTAACCATAGGGACAGCTGGAAAAACAACCGACTTAATCAGCCAGCATGTGATCATGATGAAGGAAAGTGAGAAATTCTTTAAGCTTAAAAGATTGCTTGATGAACTTAATGACAAGACAGCAATTGTTTTTGTCAATACTAAGAAAAATGCGGATGTAGTTGCCAAGAATTTGGATAAGGAAGGCTATCGTGTGACTACTTTGCACGGTGGGAAGTCACAGGAGCAAAGAGAGATCAGTCTTGAAGGATTTAGGACCAAGAGATACAATGTCCTTGTTGCAACTGATGTTGCAGGGCGTGGTATTGACATACCCGATGTGGCCCATGTGATAAACTATGATATGCCTGGGAATATTGAAATGTATACGCATCGTATTGGGCGTACTGGTCGTGCAGGGAAGACTGGTGTGGCTACAACCTTCCTGACTCTTCATGACTCGGATGTCTTCTATGATCTCAAACAGATGCTTATTCAGAGCAATAGTCCTGTTCCTCCTGAATTAGCCAGGCATGAGGCTTCAAAGTTCAAGCCAGGAAGTATTCCTGATAGACCACCTAGACGGAATGACACTGTATTTGTACATTA 2204 0.4855 MKRPDDIAVSLASSAPSSSASAAKPVFLTKAQREQLALQRRQEEIAEQRRRQEQLLSLNRPSDPTADTRPSDSDRRDRDRDRDRDRDRDRDRDRDRDRDRDRDRERDRERDRERDRARDRDRDRDRESERRNREREREEEARVRERARLEKLAERERDKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREQIRKKEGVEEKPEEAAAQKMKEAAADLYDTFDMRVDRHWTEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWSESKLSAELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYLGIKVVSIVGGQSIEEQGFRIRQGCEIVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFKLKRLLDELNDKTAIVFVNTKKNADVVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFVH 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00759 734 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 345 540 IPR014001 -
Bva14g00759 734 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 567 711 IPR001650 -
Bva14g00759 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 693 IPR027417 -
Bva14g00759 734 MobiDBLite consensus disorder prediction 231 255 - -
Bva14g00759 734 CDD SF2_C_DEAD 552 681 - -
Bva14g00759 734 Pfam Helicase conserved C-terminal domain 566 672 IPR001650 -
Bva14g00759 734 CDD DEADc_DDX23 325 541 - -
Bva14g00759 734 MobiDBLite consensus disorder prediction 1 26 - -
Bva14g00759 734 MobiDBLite consensus disorder prediction 709 734 - -
Bva14g00759 734 MobiDBLite consensus disorder prediction 67 173 - -
Bva14g00759 734 Gene3D - 275 544 IPR027417 -
Bva14g00759 734 Gene3D - 545 732 IPR027417 -
Bva14g00759 734 MobiDBLite consensus disorder prediction 39 175 - -
Bva14g00759 734 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 469 477 IPR000629 -
Bva14g00759 734 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 314 342 IPR014014 GO:0003724
Bva14g00759 734 Coils Coil 28 58 - -
Bva14g00759 734 MobiDBLite consensus disorder prediction 702 734 - -
Bva14g00759 734 PANTHER - 96 727 - -
Bva14g00759 734 Pfam DEAD/DEAH box helicase 339 529 IPR011545 GO:0003676|GO:0005524
Bva14g00759 734 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 96 727 - -
Bva14g00759 734 Coils Coil 126 155 - -
Bva14g00759 734 SMART helicmild6 591 672 IPR001650 -
Bva14g00759 734 MobiDBLite consensus disorder prediction 11 25 - -
Bva14g00759 734 SMART ultradead3 333 555 IPR014001 -
Bva14g00759 734 Coils Coil 226 252 - -
Bva14g00759 734 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00759 Bva-Chr14 3524216 3526868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00759 315 708 Eukaryotic Initiation Factors Gene Family AT1G72730 32.911 1.25e-60 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00759 K12858 - gmx:100792810 1106.28