Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00742 ATGGCTGATTCAGACAACGAGTCAGGAGGTCAACCCGGAAACACAAGCACCAACAATGAATTTTTAGCTTGCAGAGAGCAAGACAGGTTCCTGCCCATAGCCAACGTTAGCAGGATCATGAAGAAAGCATTACCGGCAAACGCTAAGATCTCAAAGGAAGCCAAGGAGACTGTGCAGGAGTGTGTATCGGAGTTCATCAGCTTCATCACTGGGGAAGCCTCTGATAAGTGccagaaagagaagaggaagacAATCAACGGTGATGATCTGCTGTGGGCCATGACCACACTGGGGTTTGAAGAGTATGTGGAGCCCTTGAAGATTTATCTGCAGAAGTATAGGGAGATGGAAGGGGAGAAGACTGCTTTGATTGTGGGGAAGCAGCAGGGGAGTGATCCCACGAGGGATGGCAATGGTGGGGATTTTGGTTATGCCCATGTCCATGACCATGGAGGGCCATCCACCcttatgatgatgatggggCATCAAGTTCAGGGCCACATGTATGGATCTGGCAGTGGATCAGCATCTTCTGGAAGGTCTAGGTA 548 0.4653 MADSDNESGGQPGNTSTNNEFLACREQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKTALIVGKQQGSDPTRDGNGGDFGYAHVHDHGGPSTLMMMMGHQVQGHMYGSGSGSASSGRSR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00742 182 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 169 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva14g00742 182 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Bva14g00742 182 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bva14g00742 182 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 169 - -
Bva14g00742 182 Gene3D Histone, subunit A 22 138 IPR009072 GO:0046982
Bva14g00742 182 SUPERFAMILY Histone-fold 27 127 IPR009072 GO:0046982
Bva14g00742 182 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Bva14g00742 182 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Bva14g00742 182 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00742 Bva-Chr14 3438760 3439575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00742 1 168 CCAAT-HAP3 Transcription Factor Family AT4G14540 68.824 1.14e-71 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva14g00742 CBFD_NFYB_HMF 1.4e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00742 K08065 - gmx:100305641 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02010 05 15321320 15334886 Bva14g00742 14 3438760 3439575 BWGD
Bva14g00742 14 3438760 3439575 Bva14g00742 14 3438760 3439575 ECH