Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00739 ATGGGAAATGTGAATACTAGAGAAGATGAGGATGGTAGTCCACCAGGGGCTGAAGAAGGTGGTGGCAGTTTGCAGGAGGACATGTCTACAGCAGATGGAGTTGGGAACGCCGGGTATCATGCGCATGGTGTGACTTCTGAGATGATGGGTCAGTCTCCTCCGACAAGCCCTAGAGCTACCCAATCTCCATTGATGTTCACTCCTCAAGTCCCTGTGATTCCACTACAAAGACCGGATGAGATGCATGTTCCAAGTCATTCCTTGATGCAAACTACTTCAGGATATGAAGATATGTGCAGTGAACAAGGAATTCCAACTATGATTACTTGGACCTACGATGGAAAAGAAGTCGCTGTTGAGGGATCATGGGATAATTGGAAAGCAAGAATACCCTTGCAGAGGTCGGGGAAAGACTTCACTATAATGAAGGTACTGCCTTCTGGTGTATACCAGTACAAATTTCTTGTTGATGGACGCTGGAGGTATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCCGGCAATGCTCACAACATATTGGACTTGCAGGATTATGTTCCTGAAGACCTTGGAAGCATTTCTAGCTTTGAACCTCCTCAGTCGCCAGAATCTAGCTATAATAACTTGCAACTTGGCTCTGAAGACTATGCAAAGGAGCCACCACTGTGTCCACCACACATGCAAATGACATTGCTTAACTTGCCTGCAACAAACATGGAAATCCCACCTCCTTTATCAAGACCTCAGCACGTGGTGCTCAATCATCTTTACATGCAGAAAGGAAAGAGATGTCCTTCTGTGGTTGCACTTGGTACAACTCATCGGTTTATATCCAAATATGTCACCGTCGTGCTATACAAGTCTTTGCACAAGTA 875 0.4594 MGNVNTREDEDGSPPGAEEGGGSLQEDMSTADGVGNAGYHAHGVTSEMMGQSPPTSPRATQSPLMFTPQVPVIPLQRPDEMHVPSHSLMQTTSGYEDMCSEQGIPTMITWTYDGKEVAVEGSWDNWKARIPLQRSGKDFTIMKVLPSGVYQYKFLVDGRWRYAPDLPWAQDDAGNAHNILDLQDYVPEDLGSISSFEPPQSPESSYNNLQLGSEDYAKEPPLCPPHMQMTLLNLPATNMEIPPPLSRPQHVVLNHLYMQKGKRCPSVVALGTTHRFISKYVTVVLYKSLHK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00739 291 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 217 287 IPR006828 GO:0005515
Bva14g00739 291 MobiDBLite consensus disorder prediction 48 63 - -
Bva14g00739 291 CDD E_set_AMPKbeta_like_N 105 181 - -
Bva14g00739 291 Gene3D - 193 289 - -
Bva14g00739 291 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 290 - -
Bva14g00739 291 MobiDBLite consensus disorder prediction 1 63 - -
Bva14g00739 291 Pfam Glycogen recognition site of AMP-activated protein kinase 104 183 IPR032640 -
Bva14g00739 291 Gene3D Immunoglobulins 97 186 IPR013783 -
Bva14g00739 291 SMART AMPKBI_2 199 289 IPR006828 GO:0005515
Bva14g00739 291 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 290 IPR043554 -
Bva14g00739 291 SUPERFAMILY E set domains 103 189 IPR014756 -
Bva14g00739 291 SUPERFAMILY AMPKBI-like 186 288 IPR037256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00739 Bva-Chr14 3426422 3429955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00739 103 184 Protein tyrosine phosphatase (PTP) family AT3G01510 34.091 7.81e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00739 K07199 - jre:109018711 458.373