Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00729 ATGAGAGTGAAAATTGTGAGAACTGTGAAAATCAATTCATTTTCTGAAGGAGTTCATCTACAAGAACAGCTTTCTCAGGAGGGCCTGGTAATTTATGAGGCTTTGTTTAGAAAGTTGATGGATAATGATGAGGCTCAAGCTAAGAAATCCTTGCTTTCAGATTTCAATGAGAAGAATGAGCTTCAGAGAAGGCGGCCACAACGTGGCAGTCCTTCTAAATCTGGTGCAGAGATCAATCGCCAAGAGAAAAATCTTGTCCAAATCCCCATACATCCTGAAACAATAGCTCCTAAACCAGAATTTGATGTCAAGCAAGTGTTAACCCTGTTGGCTGCCTATTTAGGTGGAGGCACCCTTTGTTTCTTCCTCATCAGGCATCAAATCAATGGTATAAAAACCAATGGCTTTCTTGATTCCCTTTACTTCTGTGTTGTGACTATGACTACCGTTGGTTATGGGGATCTTGTGCCCAGCAGCACATTGGCAAAACTTCTTGCCTGCATTTATGTCTTCACCGGCATGGTTCTTGGTGGGTTAATTCTCGGCAAGGCAGCAGATTACATTGTGGAAAAGCAGGAAATTTTAATGGTTAAAGCCATATACACGAGTGCAAAATTTGGTCCAGAAGAACTTGTCAAGGAGGCTGAAACTCACAAATCTAAATACAAGTTCATGTATGCAGCAGCTGTTCTTTTGGTGCTTATGATTGCAGGAACCctttttctgtattttattGAAGACCTAGGACTTGTAAATGCCTTCTATTGTGTTTGTACCACCATCACTACTCTAGGCTATGGGGATGAGAGCTTCTCAACTGGTATAGGCCGTACCTTTGCTGTTTTCTGGATATTGAGCAGCACCATGTGCTTGGCTCAGTTCTTTCTCTATCTTGCTGAACTATACACTGAAGATAGACAAAAATCATTGGCAAAAATGGTTCTCACGCGAAAATTGTCACTCTCAGATCTTGAAGAAGCAGATCTTGATCATGATAACTCTGTTAGTGCTGCGGAGTTCGTTGTATATAAGTTGAAGGAAATGGGAAAGATCAGCCAAGAAGATATTGCAATTGTGATGGAGAGCTTTAGAAAACTTGATATTGATCAGTCAGGAAGTTTGACAGAAGCTGATCTCAGATATTG 1145 0.4052 MRVKIVRTVKINSFSEGVHLQEQLSQEGLVIYEALFRKLMDNDEAQAKKSLLSDFNEKNELQRRRPQRGSPSKSGAEINRQEKNLVQIPIHPETIAPKPEFDVKQVLTLLAAYLGGGTLCFFLIRHQINGIKTNGFLDSLYFCVVTMTTVGYGDLVPSSTLAKLLACIYVFTGMVLGGLILGKAADYIVEKQEILMVKAIYTSAKFGPEELVKEAETHKSKYKFMYAAAVLLVLMIAGTLFLYFIEDLGLVNAFYCVCTTITTLGYGDESFSTGIGRTFAVFWILSSTMCLAQFFLYLAELYTEDRQKSLAKMVLTRKLSLSDLEEADLDHDNSVSAAEFVVYKLKEMGKISQEDIAIVMESFRKLDIDQSGSLTEADLRY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00729 381 Pfam Ion channel 230 302 IPR013099 -
Bva14g00729 381 Pfam Ion channel 111 189 IPR013099 -
Bva14g00729 381 Gene3D - 316 381 - -
Bva14g00729 381 ProSitePatterns EF-hand calcium-binding domain. 328 340 IPR018247 -
Bva14g00729 381 ProSiteProfiles EF-hand calcium-binding domain profile. 354 381 IPR002048 GO:0005509
Bva14g00729 381 Gene3D - 101 194 - -
Bva14g00729 381 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 52 378 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva14g00729 381 PRINTS Two pore domain K+ channel signature 262 271 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva14g00729 381 PRINTS Two pore domain K+ channel signature 145 173 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bva14g00729 381 SUPERFAMILY EF-hand 324 380 IPR011992 -
Bva14g00729 381 SUPERFAMILY Voltage-gated potassium channels 218 317 - -
Bva14g00729 381 Gene3D - 207 312 - -
Bva14g00729 381 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Bva14g00729 381 SUPERFAMILY Voltage-gated potassium channels 105 190 - -
Bva14g00729 381 MobiDBLite consensus disorder prediction 56 76 - -
Bva14g00729 381 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 52 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00729 Bva-Chr14 3380993 3382892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva14g00729 89 379 Ion Channels AT5G55630 56.419 1.18e-121 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00729 K05389 - gmx:100799492 454.136