Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva14g00728 ATGACATCTATACCGTCGAAAAAGTTATGGATTCGGCGGCAACAATGCCCTTGTGGAGATTGGAAATGTTATATTGCGTATGAGGGTGATGCTGAGGAGGCTTCTGCTGCGCCAGAATTGATGAAGACAGAGAAAGCATCAGAAGCAATGGTTGCTCCCTATGTTGGAATGGTGTTTAAGAGTGATGAGGATGCATTTGATTATTATGGGAACTTTGCTAGGAAAAATGGGTTCTCTATTCGGAAAGAAAGATCAAGACTTAGTCCCCAGTTGGGCATTTACAAGCGTGACTTTGTTTGTTATCGTTCTGGGTTTGCCCCAGTGAAGAAGAAGCCTAATGGAGAACATCATAGAGATAGGAAATCGGTGCGGTGTGGATGTGATGCAAAAATGTACTTGTCAAAGGAGATAGTAGAGGGGGTTCCCCAATGGTTTGTTGTGCAGTTTAGTAATGTACATAATCATGAACTTTTGGAAGATGACCAGGTGCGCCTTCTTCCAGCATACCGTAAAATTCATGAGGCTGATCAAGAGCGTATACTGCTGCTTTCCAAAGCTGGGTTTCCAATACATCGGATAGTGAAGATGCTTGAGCTGGAAAAGGGGATTCAAGGTGGTCAACTACCTTTTTTGGAAAGGGACGTGAGAAATTTTGTTCAAAACCGTAAGAAGGTTGTTCAAGAAAATGAGGCAATGCTCagtgaaaagagagaaaatgatatattagaACTTCTTGAGGCATGCAAAGCCATGAAAGAGGCAGATGATGACTTTGTTTACGATTTTACAGTGGATGAGCATGAAAAGGTTGCAAACATCGCTTGGTCATATGGTGGCTCAGTTAATGCATATTCTATGTTTAATGATGTAGTTTATTTTGACACTCCTTACCGATCAATAACATATGGATTGCTTTTTGGAGCATGGTTTGGAATTGACAACTACGGTAGAACCATTTTCTTTGGATGTGTTTTATTGCAGGATGAAACACCACGATCCTTCTCATGGGCATTACAGACTTTTGTCCGATTCATGAGAGGTAGATATCCACAAACAATAGTAACTGATCTTGACCCTGGGCTAAGAGATGCCCTAAGAAGTGAATTGCCAAGCACCAAGCATGTCATTTCTATATGGAATATTCTGTCCAAGGTACCCAGCTGGTTTTCTCTTGCTCTTGATTCTCGCTATGCGGAATTCAAATCCGAGTTCGATGCCTTATATCAGATGGATAATGCAGAGGAGTTTGAACTTCAATGGAACCAAATGATTTCTGTGTTTGGACTTGGTGCAGATAAGCATATAGATTTACTATATTCCTCACGGGCATCCTGGGCACTATCCTATGTAAAAGTTTTCTATCTGGCTCGAATGGATACAACAACCTACTCAAAGTCTATTGATGCATTTTTGAAAGGGATCTTCTATGGGCAAACATGTTTGCGTAGCTTCTTTGAGCAGGTAGGCATTTCTGCAAATATTCAGTATCAAGTACGTCAAGAGATTCAATACATATGTCTTAAAACTTGCATACCCATTGAAGAGCAGGCACGGAGTATTCTCACACCTTTTGCTTTCAACGCTTTGCAACATGAGTTATTGCTGGCAATGCAATATGCTACATCTGAAATGGCCAATGGATCATATATTGTACGCCACTTTAAAAGGATGGACGGAGAACGTCTTGTAATATGGTTGCCTGAAGAAGAACAGATACACTGCTCTTGCAAGGAGTTTGAATTCTCGGGAATATTATGCAGACATGCTCTTCGTGTATTTATGGCAAAGAACTACTTTGAGCTGCCTGACAGATATTACTTGAATAGGTGGCGACGGgaatattctttatttcttgATGTTGACCGTAATAATCAAAGTGTTGATGATGAATGGTTTCAAGAGTATCAGTCCCTTGCCGAAACATTATTTGCAGAATCATCAATGACAAAGGAGCGATCTGATTATGTTCGCAGAGAACTGACAAAAGAACTTACTAGGATTCTTAATGAGGTTAGAAGTCTGCCCGAGACCGATGGAGTCACCATGGACTTGACCGTTTCACCAACCAGTAGAAATCTGCCTGAGACTGATGGAGTCGCCATGGACTTAACTGTGTA 2117 0.4043 MTSIPSKKLWIRRQQCPCGDWKCYIAYEGDAEEASAAPELMKTEKASEAMVAPYVGMVFKSDEDAFDYYGNFARKNGFSIRKERSRLSPQLGIYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEIVEGVPQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENEAMLSEKRENDILELLEACKAMKEADDDFVYDFTVDEHEKVANIAWSYGGSVNAYSMFNDVVYFDTPYRSITYGLLFGAWFGIDNYGRTIFFGCVLLQDETPRSFSWALQTFVRFMRGRYPQTIVTDLDPGLRDALRSELPSTKHVISIWNILSKVPSWFSLALDSRYAEFKSEFDALYQMDNAEEFELQWNQMISVFGLGADKHIDLLYSSRASWALSYVKVFYLARMDTTTYSKSIDAFLKGIFYGQTCLRSFFEQVGISANIQYQVRQEIQYICLKTCIPIEEQARSILTPFAFNALQHELLLAMQYATSEMANGSYIVRHFKRMDGERLVIWLPEEEQIHCSCKEFEFSGILCRHALRVFMAKNYFELPDRYYLNRWRREYSLFLDVDRNNQSVDDEWFQEYQSLAETLFAESSMTKERSDYVRRELTKELTRILNEVRSLPETDGVTMDLTVSPTSRNLPETDGVAMDLTV 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva14g00728 705 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 680 IPR031052 GO:0006355
Bva14g00728 705 ProSiteProfiles Zinc finger SWIM-type profile. 562 597 IPR007527 GO:0008270
Bva14g00728 705 Pfam SWIM zinc finger 568 597 IPR007527 GO:0008270
Bva14g00728 705 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 680 - -
Bva14g00728 705 Pfam MULE transposase domain 290 383 IPR018289 -
Bva14g00728 705 SMART 26again6 572 599 IPR006564 GO:0008270
Bva14g00728 705 Pfam FAR1 DNA-binding domain 67 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva14g00728 Bva-Chr14 3376994 3379943 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva14g00728 MULE 5.4e-15 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva14g00728 - - gmx:100817107 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva14g00728 14 3376994 3379943 Bva14g00728 14 3376994 3379943 ECH